Sequence 1: | NP_573330.3 | Gene: | htk / 32877 | FlyBaseID: | FBgn0085451 | Length: | 2486 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038968184.1 | Gene: | Arid4a / 314205 | RGDID: | 1307442 | Length: | 1277 | Species: | Rattus norvegicus |
Alignment Length: | 1508 | Identity: | 381/1508 - (25%) |
---|---|---|---|
Similarity: | 576/1508 - (38%) | Gaps: | 425/1508 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MQQMDDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKVAYKQGLGSGIVSDDAIKAPTGQLRV 65
Fly 66 GAVVEVRHPDRKELVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLT 130
Fly 131 HPEHFGNPVVGGR--RGRRRG-HLNEDSSEDD---DESDAKEVVNEKEENIGKVVCVETESKKKD 189
Fly 190 KEKWFPALVVAPTAQATVRIRVKDEYLVRSFKDGRYYTVPKKEATEF------TREVASKQDVPA 248
Fly 249 VQAALEFLDSSVLPAHWDRDSLFGLTNISSDDEGEIDSDSSDDEPH-----------------EE 296
Fly 297 KDRFVAQLYKYMDDRGTPLNKVPSILSRDVDLYRLFRAVQKRGGYNRVTSQNQWKLIAMRLGFTP 361
Fly 362 CTVSVMNLVKQAYKKFLQPYGDFHRKLGCSMLMTSRNSNRSK------GRSLVRANSVASPKPME 420
Fly 421 TMKTETISKLAQPNQTNVVASTSSSAAAASVAASSTPARAVSTASQSAAEESGNTSESSVVVEPP 485
Fly 486 KKQRKGSAASSQQGKVKSLV--EKYEEKSTAVQATSSGTVAGSGASASAAAMPTTSAAASTATNL 548
Fly 549 SSATSGGSATIATTAMNKDA-ESDLPLAKIKAAAVAAASTRHSMEKETNISSGSSASASSKANSA 612
Fly 613 EMQRSRDASPSVAAPPSAGASTSGAAATAQTASNKKEKHQRSKQADKEKDKDKEEKQASSGKRKK 677
Fly 678 EKISVEKIDTGDFVVGIGDKLKVNYHEKKSPSSHGSTYEAKVIEISVQRGVPMYLVHYTGWNNRY 742
Fly 743 DEWVPRERIAENLTKGSKQKTRTISTSSANSGSGGGGGGGGGGGGGGGGGGGSLLVQGSQPPGVS 807
Fly 808 DKQPGKDGCSKMSPSSGNSTGPGAPSLSGSLGGASSTPSLLSTVVKTPPTGGAKRGRGRSDSMPP 872
Fly 873 RSTTPSSVVAHSGRTKSPAASQ--PQLQQQMKKRPTRVVPGTTTPRRVSDASMASESDSDSDEPV 935
Fly 936 RRPKR---QSAKDKPQAGKAQPPGKGRLASSASSTAPAAHPSDDSEEDEEEEEPSAARAASSKQQ 997
Fly 998 QQQASSLRGSRAGGNRAMSSGAASAKGRDYDLSEIRSELKG------FQPKLLTNAASNEERKDL 1056
Fly 1057 AKKEPSDEPAL---QDIKKEPKLESSAKSSSTELSSE--TESYADEDSQSSDYRKQLKGSGAGKK 1116
Fly 1117 EPTASPSKLHHEPVTKRELAVKEEPLKIEPKTEPKEEE----------------------TKSKP 1159
Fly 1160 FLSGADIK----------PTALIAPARFGNTSAAQAASSSGSSSTTAKYTSVIV----------- 1203
Fly 1204 ------------EKPLTIG--------------GKK-----------SVEQHVPKK-AELLKKQS 1230
Fly 1231 GGAGGTAASSSAASQESKKFAEPVASLKV-------EMPAACSP----------------SSSSS 1272
Fly 1273 SSSSF-----CSTGSAVSSSSATRSLPDMSKLEISSGTVPGATPGAAALQPSNVAQVSSSGAAKE 1332
Fly 1333 SKYSSSGGAAAGS 1345 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
htk | NP_573330.3 | RBB1NT | 171..262 | CDD:285392 | 31/96 (32%) |
ARID | 299..381 | CDD:279697 | 35/81 (43%) | ||
Tudor-knot | 692..751 | CDD:288553 | 24/58 (41%) | ||
Arid4a | XP_038968184.1 | Tudor_ARID4A_rpt1 | 23..80 | CDD:410530 | 31/59 (53%) |
Tudor_SF | 81..137 | CDD:413384 | 35/56 (63%) | ||
RBB1NT | 189..281 | CDD:400474 | 32/100 (32%) | ||
ARID | 331..416 | CDD:355778 | 36/84 (43%) | ||
CBD_RBP1_like | 597..655 | CDD:350843 | 26/61 (43%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166352286 | |
Domainoid | 1 | 1.000 | 182 | 1.000 | Domainoid score | I3367 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2744 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 412 | 1.000 | Inparanoid score | I1796 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0003167 | |
OrthoInspector | 1 | 1.000 | - | - | otm45563 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR13964 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2560 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.980 |