DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: htk and Morf4l1

Sequence 1:NP_573330.3 Gene:htk FlyBaseID:FBgn0085451 Length:2486 Species:Drosophila melanogaster
Sequence 2:XP_008764667.1 Gene:Morf4l1 RGDID:1307938 Length:362 Species:Rattus norvegicus

Alignment Length:246 Identity:47/247 (19%)
Similarity:75/247 (30%) Gaps:89/247 (36%)


  Fly   711 HGS-TYEAKVIEISVQRGVPMYLVHYTGWNNR--------------------------------- 741
            ||. .||||.::::::.....|.:||:|||.:                                 
  Rat    21 HGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKKSAVRPRRSEKSLKTREDIVALFPVPEGAPSVHH 85

  Fly   742 ------YDEWVPRERIAENLTKGSKQKTRTISTSSANSGSGGGGGGGGGGGGGGGGGGGSLLVQG 800
                  :|||||..|:.: ....:.||.|.:..::....:.|...|.               ..|
  Rat    86 PLLTSSWDEWVPESRVLK-YVDANLQKQRELQKANQEQYAEGKMRGA---------------APG 134

  Fly   801 SQPPGVSDKQPGKDGCSKMSPSSGNSTGPGAPSLSGSLGGASSTPSLLSTVVKTPPTGGAKRGRG 865
            .:..|:..|............:.||..|          |..|.||.        ||    ::.|.
  Rat   135 KKTSGLQQKNVEVKTKKNKQKTPGNGDG----------GSTSETPQ--------PP----RKKRA 177

  Fly   866 RSDSMPPRSTTPSSVVAHSGRTKSPAASQPQL---------QQQMKKRPTR 907
            |.|.......|..:.|  ..:.|.|...:|.|         |:|:...|.:
  Rat   178 RVDPTVENEETFMNRV--EVKVKIPEELKPWLVDDWDLITRQKQLFYLPAK 226

Known Domains:


GeneSequenceDomainRegion External IDIdentity
htkNP_573330.3 RBB1NT 171..262 CDD:285392
ARID 299..381 CDD:279697
Tudor-knot 692..751 CDD:288553 18/80 (23%)
Morf4l1XP_008764667.1 Tudor-knot 11..103 CDD:288553 18/82 (22%)
MRG 174..348 CDD:283390 12/56 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1624495at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.