DRSC/TRiP Functional Genomics Resources

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Protein Alignment: htk and mrg-1

Sequence 1:NP_573330.3 Gene:htk FlyBaseID:FBgn0085451 Length:2486 Species:Drosophila melanogaster
Sequence 2:NP_001122727.1 Gene:mrg-1 WormBaseID:WBGene00003406 Length:337 Species:Caenorhabditis elegans

Alignment Length:77 Identity:25/78 (32%)
Similarity:38/78 (49%) Gaps:18/78 (23%)


  Fly   712 GSTYEAKVIEISVQR-GVPMYLVHYTGWNNRYDEWVP----RERI-------------AENLTKG 758
            |..|:||:.:|.... |..:|.||:.||||||||.:|    ::||             ||..|..
 Worm    19 GKPYDAKITDIKTNSDGKELYCVHFKGWNNRYDEKIPVGEEKDRIFKGTASEYAEKHNAELPTTA 83

  Fly   759 SKQKTRTISTSS 770
            .|.|.::::..:
 Worm    84 LKPKKKSLAAEA 95

Known Domains:


GeneSequenceDomainRegion External IDIdentity
htkNP_573330.3 RBB1NT 171..262 CDD:285392
ARID 299..381 CDD:279697
Tudor-knot 692..751 CDD:288553 19/44 (43%)
mrg-1NP_001122727.1 Tudor-knot 7..63 CDD:288553 19/44 (43%)
MRG 121..309 CDD:283390
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1624495at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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