Protein Alignment htk and ARID3C

DIOPT Version :10

• Sequence 1: NP_573330.3
• Gene: htk / 32877
• FlyBaseID: FBgn0085451
• Length: 2486
• Species: Drosophila melanogaster
• Sequence 2: XP_047278737.1
• Gene: ARID3C / 138715
• HGNCID: 21209
• Length: 562
• Species: Homo sapiens
• Alignment Length: 339
• Identity: 83/339 - (24%)
• Similarity: 123/339 - (36%)
• Gaps: 80/339 - (23%)

  Fly   172 EENIGKVVCVETESKKKDKEKWFPALVVAPTAQATVRIRVKDEYLVRSFKDGRYYTVPKKEATEF 236
            |..:|.|...|.|..::|:||                               |.....::||.|.
Human   192 EGALGNVGAEEEEDAEEDEEK-------------------------------REEAGAEEEAAEE 225

  Fly   237 TREVASKQDVPAVQAALEFLDSSVLPAHWDRDSLFGLTNISSDDEGEIDSDSSDDEPHEEKDRFV 301
            :|..|.....|:.|      ...:.|..|..:..|       ....|:|:|       .::..|:
Human   226 SRPGAQGPSSPSSQ------PPGLHPHEWTYEEQF-------KQLYELDAD-------PKRKEFL 270

  Fly   302 AQLYKYMDDRGTPLNKVPSILSRDVDLYRLFRAVQKRGGYNRVTSQNQWKLIAMRLGFTPCTVSV 366
            ..|:.:|..||||:|:||.:..:.:|||.|||.|..:||...|.::..|:.:...|.......|.
Human   271 DDLFSFMQKRGTPVNRVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSA 335

  Fly   367 MNLVKQAYKKFLQPYGDFHRKLGC-SMLMTSRNSNRSKGR----SLVRANSVASPKPMETMKTET 426
            ...::..|.|:|.||....|.|.. ..|..:.:|||.:||    :......:|.|.|........
Human   336 AFTLRTQYMKYLYPYECETRALSSPGELQAAIDSNRREGRRQAYTATPLFGLAGPPPRGAQDPAL 400

  Fly   427 ISKLAQPNQTNVVASTSSSAAAASVAASSTPARAVSTASQS--AAEES---------------GN 474
            ....|.|       :|.||...|..:.|..||.|.:..|.|  ..|||               |.
Human   401 GPGPAPP-------ATQSSPGPAQGSTSGLPAHACAQLSPSPIKKEESGIPNPCLALPVGLALGP 458

  Fly   475 TSESSVVVEPPKKQ 488
            |.|.....|||:|:
Human   459 TREKLAPEEPPEKR 472

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
htk	NP_573330.3	Tudor_ARID4_rpt1	10..60	CDD:410460
		Tudor_ARID4_rpt2	65..118	CDD:410461
		RBB1NT	170..263	CDD:462390	16/90 (18%)
		ARID	296..381	CDD:460187	26/84 (31%)
		CBD_RBP1_like	698..758	CDD:350843
ARID3C	XP_047278737.1	ARID_ARID3C	251..377	CDD:350644	40/139 (29%)