Protein Alignment htk and LOC102555137

DIOPT Version :10

• Sequence 1: NP_573330.3
• Gene: htk / 32877
• FlyBaseID: FBgn0085451
• Length: 2486
• Species: Drosophila melanogaster
• Sequence 2: XP_017446907.1
• Gene: LOC102555137 / 102555137
• RGDID: 7566528
• Length: 381
• Species: Rattus norvegicus
• Alignment Length: 298
• Identity: 71/298 - (23%)
• Similarity: 125/298 - (41%)
• Gaps: 85/298 - (28%)

  Fly  2222 IVGITPLPPDTPPPVPVAAIQQQQQHQLQSGQQQQAAKTGEVNPSGPNSS--------PDSASQD 2278
            :|.:..|.....|.:....::..:.:.|           |.|.|..|:.|        |.::|||
  Rat   107 LVDLDDLDERDKPSIEDVIVEGSESNSL-----------GSVLPDLPSVSQHSFSVALPLTSSQD 160

  Fly  2279 ES-GEEAKKNAGLE-----HEDSTGLGALNKRKRNRKPLPMSAQTAAAVAAQLQSLGKRRRQVSG 2337
            || |.:::.:..:|     .|...||  ..:...||....:::.|...:..:      |:|:..|
  Rat   161 ESRGIKSEGDITIEVDSIAEESQEGL--CERESANRSEASVASGTCGIITRE------RKRRAKG 217

  Fly  2338 M------------RNQKTT---TTAA----------GSDTD-----DNSDNIAP----NAGQQQQ 2368
            .            :.||.|   |:||          .||::     |:|.|..|    |..:.|:
  Rat   218 QKRPSDANSVLMTKKQKQTPKRTSAAAKSEKNGAGQSSDSEDLPATDSSSNSTPVKHLNLPKPQK 282

  Fly  2369 QPRQSARQHMMPQSNAQQQQQQQLLQQQQTQLPQGIQSTNSSGVRPCPYNF-LVELDPALSSDEC 2432
            .||..||..::.....::.:::..                .|..|...::| |.||| .::|.|.
  Rat   283 LPRSPARVSLLKDRGKEKHKEKPA----------------DSSPRTYKWSFQLNELD-NMNSIER 330

  Fly  2433 ITILRKQIQDLRKAYNTIKGELAVIDRRRKKLRRRERE 2470
            ::.|:::.|::||.|.::|.|:|.||||||.|:|::||
  Rat   331 LSFLQEKAQEIRKHYMSLKLEVATIDRRRKSLKRKDRE 368

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
htk	NP_573330.3	Tudor_ARID4_rpt1	10..60	CDD:410460
		Tudor_ARID4_rpt2	65..118	CDD:410461
		RBB1NT	170..263	CDD:462390
		ARID	296..381	CDD:460187
		CBD_RBP1_like	698..758	CDD:350843
LOC102555137	XP_017446907.1	None