Protein Alignment htk and arid5b

DIOPT Version :10

• Sequence 1: NP_573330.3
• Gene: htk / 32877
• FlyBaseID: FBgn0085451
• Length: 2486
• Species: Drosophila melanogaster
• Sequence 2: NP_001429708.1
• Gene: arid5b / 100536827
• ZFINID: ZDB-GENE-121214-272
• Length: 1156
• Species: Danio rerio
• Alignment Length: 805
• Identity: 151/805 - (18%)
• Similarity: 286/805 - (35%)
• Gaps: 166/805 - (20%)

  Fly   268 DSLFGLTNISSDDEGEIDSDSSDDEP--------HEEKDRFVAQLYKYMDDRGTPLNKVPSILSR 324
            ||..|::...:...|......|:::|        ..::..|:..|||||.:|.||:.::|.:..:
Zfish   290 DSKSGVSKPRNPSTGSCKRVQSENKPKGDGGDECRTDEQAFLVALYKYMKERKTPIERIPYLGFK 354

  Fly   325 DVDLYRLFRAVQKRGGYNRVTSQNQWKLIAMRLGFTPCTVSVMNLVKQAYKKFLQPYGDFHRKLG 389
            .::|:.:|:|.||.|||..:|::.|||.:...||..|.:.|.....::.|::.:.||..|.:...
Zfish   355 QINLWTMFQAAQKLGGYEVITARRQWKNVYDELGGNPGSTSAATCTRRHYERLILPYERFTKGEE 419

  Fly   390 CSMLMTS--RNSNRSKGRSLVRANSVASPKPMETMKTETISKLAQPNQTNVVASTSSSAAAASVA 452
            ...|..:  |....|...|:::|..:...:|.:..||....|.|.
Zfish   420 DKPLPPAKPRKQEGSVQESIIKAKMMPIKRPKDEQKTPRGDKDAS-------------------- 464

  Fly   453 ASSTPARAVSTASQSAAEESGNTSESSVVVEPPKKQRKGSAASSQQGKVKSLVEKYEEK---STA 514
                 |:.:....:. .||......|..:..|.:..|..::..::..: ..||.|.|::   ..|
Zfish   465 -----AKVLELGMED-MEELQEKQNSQQLQAPTQTDRDPNSPLTEDDE-GVLVIKDEDQPVLHNA 522

  Fly   515 VQATSSG---TVAGSGASASA--------AAMP-------------------------TTSAAAS 543
            .:..:.|   ::...||...:        ||:|                         ..||.|:
Zfish   523 YEHANGGLLPSLPQDGAQLKSEDCDAFPVAAVPLHHGHPLPNSHTSDQWKHGILEYKVPPSALAN 587

  Fly   544 TATNLSSATSGGSATIATTAMNKDAES-DLPLAKIKAAAVAAASTRHSMEKETNISS-------- 599
            ...:...........:..|...|...| ::|..:::           .::||.:..:
Zfish   588 VEQSRPKEGQNQVVMVLPTLQQKPVTSPEIPPERVE-----------PLKKEESCFNFNPLLYPR 641

  Fly   600 GSSASASSKANSAEMQR-------------------SRDASPSVAAPPSAGASTSGAAATAQTAS 645
            |:....|..|....:.:                   ||..|.|.....|||.|:|..:::.:|:.
Zfish   642 GNPGIMSPLAKKKMLSQVSGTGLLNNYPYGPPPPLVSRRLSSSGTEVSSAGQSSSQVSSSVETSI 706

  Fly   646 NKKEKHQRSKQADKEKDKDKEEKQASSGKRKKEKISVEKIDTGDFVVGIGDKLKVNYHEKKSPSS 710
            ..| :....:.|...|.:..|::::|:...:|:..|     .|:.|......::..|.::..|
Zfish   707 VIK-RPSVIQHAQSFKSRGSEDRRSSTEGSQKDGCS-----EGEPVHHSQTLIREPYLKRVDP-- 763

  Fly   711 HGSTYEAKVIEISVQRGVPMYL------VHYTGWNNRYDEWVPRERIAENLTKGSKQKTRTISTS 769
            |.|.  .|..|:......|.:|      .|......:.:..:.:|:|       ||..:|.:.|.
Zfish   764 HSSM--EKSAEMPRPGQAPSFLSEFYSSPHLHNLCRQTEHHLSKEQI-------SKYLSRDVYTR 819

  Fly   770 SANSGSGGGGGGGGGGGGGGGGGGGSLLVQGSQPPGVSDKQPGKDGCSKMSPSSGNSTGPGAPSL 834
            .:.:..|..........|.......|...:|..|..|:::||......|.||..       .|..
Zfish   820 DSETAQGFPPSQHPDNVGLNFSARLSQKEKGPPPERVTEEQPTDLSLPKSSPLK-------LPLS 877

  Fly   835 SGSLGGASSTPSLLSTVVKTPPTGGAKRGRGRSDS---------MPPRSTTPSSVV--AHSGRTK 888
            :.:|||...  :.:...:|..|...|  |..:|.|         :||.:.:.|..|  :||...:
Zfish   878 TSTLGGIPH--AAIQQDIKNSPHFQA--GNSQSSSVDYHPRACRVPPMTVSASKKVTESHSKVLE 938

  Fly   889 SPAASQPQLQQQMK----KRPTRVVPGTTTPRRVSDASMASESDSDSDEPVRRPKRQSAKDKPQA 949
            ....|:.:.....|    .||  ::...::|:.:..|.....:..|.:......|.::......:
Zfish   939 KTPNSRGEESMGFKIDEMSRP--ILSTKSSPQNICTARPLKRNIEDLENGPTEKKIRAVTPLHCS 1001

  Fly   950 GKAQPPGKGRLASSASSTAPAAHPS 974
            .:...|||.|...:.|.:...|.|:
Zfish  1002 TQRDLPGKPRTPEADSESVKPAEPA 1026

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
htk	NP_573330.3	Tudor_ARID4_rpt1	10..60	CDD:410460
		Tudor_ARID4_rpt2	65..118	CDD:410461
		RBB1NT	170..263	CDD:462390
		ARID	296..381	CDD:460187	27/84 (32%)
		CBD_RBP1_like	698..758	CDD:350843	11/65 (17%)
arid5b	NP_001429708.1	None