Protein Alignment htk and arid5a

DIOPT Version :10

• Sequence 1: NP_573330.3
• Gene: htk / 32877
• FlyBaseID: FBgn0085451
• Length: 2486
• Species: Drosophila melanogaster
• Sequence 2: XP_073765165.1
• Gene: arid5a / 100462698
• ZFINID: ZDB-GENE-100525-3
• Length: 613
• Species: Danio rerio
• Alignment Length: 466
• Identity: 102/466 - (21%)
• Similarity: 186/466 - (39%)
• Gaps: 80/466 - (17%)

  Fly   226 YTVPKKEATEFTREVASKQDVPAVQAALEFLD------SSVLPAHWDRDSLFGLTNISSDDEGEI 284
            |.:..::|..| |.:..:.:|.|.:..||..:      :|....:.:.:||.. ||.|.|
Zfish    16 YPLRHRDAGHF-RVLDPRGEVDAAEGELEDCEKKNQELNSPNQTNGEMESLTS-TNSSED----- 73

  Fly   285 DSDSSDDEPHEEKDRFVAQLYKYMDDRGTPLNKVPSILSRDVDLYRLFRAVQKRGGYNRVTSQNQ 349
              :|..|:...|:..|:..||.:|.:|.||:.::|.:..:.::|:::::||:..|||:.||::.|
Zfish    74 --NSRSDQSESEERTFITNLYCFMKERNTPIERIPHLGFKQINLWKIYKAVETLGGYDAVTARRQ 136

  Fly   350 WKLIAMRLGFTPCTVSVMNLVKQAYKKFLQPYGDFHRKL---GCSMLMTSRNSNRSKGRSLVRAN 411
            ||.:...||.:|.:.|.....::.|::.:.|   |.|:|   ....|..|:...:.|.....|.:
Zfish   137 WKNVYDELGGSPGSTSAATCTRRHYERLVLP---FERQLRGEEDKPLPPSKPRKQYKRSPENRGS 198

  Fly   412 SVASPKPMETMKTETISKLAQPNQTNVVASTS------SSAAAASVAASSTPARAVSTASQSAAE 470
            ...|.|..:..:.|:..|:...:..:....:.      ||....|...|:.|...:|:......:
Zfish   199 KPESKKKRKMERDESEEKMLSDHHCDRGRCSHHSPWLISSDRLDSEHTSTAPVLGMSSRENPLLQ 263

  Fly   471 ESGNTSESSVVVEPPKKQRKGSAAS-----SQQGKVKSLVEKYEEKSTAVQATSSGTVAGSGASA 530
                ||....|:.|.:|:::.:.||     |:.|      .:.|..|....:.||.:......|:
Zfish   264 ----TSSPPEVISPLEKKKRLAQASLTIPASEDG------GELERPSVIHISHSSQSNTRGRHSS 318

  Fly   531 SAAAMPTTSAAASTATNLSSATSGGSATIATTAMNKDAESDLPLAKIKAAAVAAASTRHSMEKET 595
            ..:.:|.:|.:.|.:.:.|..:......||.|.....|:                      |.|.
Zfish   319 DGSPVPVSSPSGSLSRSPSPYSVSSEDCIAVTTQKSPAK----------------------EPEN 361

  Fly   596 NISSGSSASASSKANSAEMQRSRDASPSVAAPPSAGASTSGAAATAQ------TASNKKEKHQRS 654
            ..::...|.::|||          .|..|..|.|...:|...|...:      ..:...||.|||
Zfish   362 KTATRLPALSTSKA----------VSTGVCKPLSCYPNTKELANYPRLHYREFLQAGATEKTQRS 416

  Fly   655 KQADKEKDKDK 665
            ..|....||.:
Zfish   417 LLAWTSDDKSR 427

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
htk	NP_573330.3	Tudor_ARID4_rpt1	10..60	CDD:410460
		Tudor_ARID4_rpt2	65..118	CDD:410461
		RBB1NT	170..263	CDD:462390	9/42 (21%)
		ARID	296..381	CDD:460187	25/84 (30%)
		CBD_RBP1_like	698..758	CDD:350843
arid5a	XP_073765165.1	None