Protein Alignment CG18259 and Alyref

DIOPT Version :8

• Sequence 1: NP_573324.1
• Gene: CG18259 / 32866
• FlyBaseID: FBgn0030956
• Length: 474
• Species: Drosophila melanogaster
• Sequence 2: XP_006247987.1
• Gene: Alyref / 690585
• RGDID: 1594679
• Length: 256
• Species: Rattus norvegicus
• Alignment Length: 201
• Identity: 56/202 (28%)
• Similarity: 78/202 (39%)
• Gaps: 50/202 (25%)

  Fly   304 KRDPHISHGIYANENRRKAVGGG---GARDSDSGTDSDGDAAA-------PSKNK---------- 348
            |.|..:...|..|.::|...|||   |...|..|......|||       |.:|:
  Rat     4 KMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGAVQAAARVNRGGGPMRNRPAIARGAAGG 68

  Fly   349 --RRSPSPLSLRTSNTKD-------------------GYRLLVSNLHTNVTTADIRELFSDIGPV 392
              |..|:|.| |.....|                   |.:||||||...|:.|||:|||::.|.:
  Rat    69 GGRNRPAPYS-RPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTL 132

  Fly   393 ------YDARVVRPGTAEVIYKSLEHAEKAVDTYHHRQFDDQPMHCVLVNPH--SSRRSVHKASS 449
                  ||......|||:|.::....|.||:..|:....|.:||:..||...  :.||.....:.
  Rat   133 KKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQIDTQRRPAQSINR 197

  Fly   450 RTVTTN 455
            ..:|.|
  Rat   198 GGMTRN 203

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18259	NP_573324.1	RRM	<345..>443	CDD:223796	39/137 (28%)
		RRM_SKAR	366..434	CDD:241125	27/74 (36%)
Alyref	XP_006247987.1	RRM	<107..>183	CDD:223796	29/76 (38%)
		RRM_THOC4	107..180	CDD:241124	27/73 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	1	0.900				E1_KOG0533
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900