DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisRS and hars-1

DIOPT Version :9

Sequence 1:NP_573305.2 Gene:HisRS / 32841 FlyBaseID:FBgn0027087 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001023373.2 Gene:hars-1 / 177978 WormBaseID:WBGene00002001 Length:524 Species:Caenorhabditis elegans


Alignment Length:577 Identity:277/577 - (48%)
Similarity:359/577 - (62%) Gaps:83/577 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDTREQIL-EQIKVQGDLVRQLKAAKESKEKTAPSGGGRVSSSGVPAQRQQQQQPQKQQQAQVQ 64
            |:..|:.|| ::.:..||.:||||.                               .|..||.::
 Worm     5 MTAERKAILMQEAQALGDEIRQLKL-------------------------------DKADQAIIK 38

  Fly    65 QQQHEQLHQIDEEVARLLALKATLGGDAAPTNQ-KFTLKTPKGTRDYGPQQMTLRQGVLDKIVQV 128
                       |:||.:.|.:...|...||... ||.|||.||||||||.|..||..||..:.:.
 Worm    39 -----------EKVALMQAKRKEAGETGAPEKPGKFVLKTGKGTRDYGPAQSALRNSVLQTVTET 92

  Fly   129 FKRHGGEAIDTPVFELKEVLTGKYGED-SKLIYDLKDQGGEILSMRYDLTVPLARYLAMNKISSI 192
            |.|:|.|.||||||||::||.|||||: .||:|||:|||||:||:|||||||.|||||||||::|
 Worm    93 FNRYGAETIDTPVFELRDVLMGKYGEEGGKLVYDLQDQGGELLSLRYDLTVPFARYLAMNKITNI 157

  Fly   193 KRYHIAKVYRRDNPAMTKGRYREFYQCDFDIAGTYDPMLPDAECVKIVSEILDTLDIGDYVIKLN 257
            .||.||||||||.|.|::|||||||||||||||.||.|||:|||:.||.|:|..|:||::.|.||
 Worm   158 TRYQIAKVYRRDQPVMSRGRYREFYQCDFDIAGQYDLMLPEAECLGIVDELLTKLEIGEFFINLN 222

  Fly   258 HRQLLDGMFQACGVPADSFRTICSAVDKLDKSPWADVRKEMVDEKGLDEAAADRIGEYVRLS--- 319
            ||.:|:|||...|:||..|:||||:||||||:||.||.:||::||.|.:....::||.||..   
 Worm   223 HRLILEGMFAVSGIPAKDFKTICSSVDKLDKTPWEDVEQEMINEKFLTKEQTGKLGELVRFRELN 287

  Fly   320 ---GGAELVEQ------LLANEKLKAVPNAVKGLEGMKQLLKYCSIFGLDKRVSFDLSLARGLDY 375
               ...||:|:      |..|:|.|      ||.|.:|.|::|.::.|: ..|.::.||||||||
 Worm   288 SDLNNLELLEKMSQLPDLGQNDKFK------KGAEELKVLIEYLNVDGV-TTVRYEPSLARGLDY 345

  Fly   376 YTGVIYEGV----LKGESATVASPAKTSQQNGEQ-ANEPATVGSVAGGGRYDNLVGMFDPRGKAV 435
            |||.|||.|    |:|          |:.:|.|. |.:|..|||||.|||||.||.|||.:.. |
 Worm   346 YTGAIYEAVAPKALEG----------TAVENSEDTAGQPVGVGSVAAGGRYDGLVKMFDSKAN-V 399

  Fly   436 PCVGVSIGVERIFSVLEARAAASGLKLRTSDVEVYVASAHKGLHEQRLKVLNLLWDAGVKAEHSY 500
            ||.|||.|:||:|:::|||...:   :||:..|||||||.|.|...|.|::.:|..||:|.|.:.
 Worm   400 PCCGVSFGIERLFAIMEARQKVA---IRTTQTEVYVASAQKNLVRDRKKLVKMLRSAGIKTEMAL 461

  Fly   501 KLNPKLLVQLQHCEEHQIPLVVVLGDAELAQGLVKLREVTTREETNVKLEDLAAEIR 557
            |.|||||.|.|:.||.:|||.:|:|:.||..|:||||.|.||:|..:||:.|...:|
 Worm   462 KANPKLLTQFQYAEERRIPLAIVIGEQELKDGVVKLRNVVTRDEQTIKLDQLITAVR 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisRSNP_573305.2 S15_NS1_EPRS_RNA-bind 6..92 CDD:294248 16/86 (19%)
HisS 98..561 CDD:223202 257/478 (54%)
HisRS-like_core 114..452 CDD:238396 193/355 (54%)
HisRS_anticodon 467..557 CDD:238436 45/89 (51%)
hars-1NP_001023373.2 S15_NS1_EPRS_RNA-bind 13..63 CDD:294248 17/91 (19%)
HisS 65..522 CDD:223202 255/475 (54%)
HisRS-like_core 78..416 CDD:238396 193/355 (54%)
HisRS_anticodon 427..518 CDD:238436 45/90 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165954
Domainoid 1 1.000 331 1.000 Domainoid score I611
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1592
Inparanoid 1 1.050 492 1.000 Inparanoid score I775
Isobase 1 0.950 - 0 Normalized mean entropy S444
OMA 1 1.010 - - QHG55859
OrthoDB 1 1.010 - - D1065556at2759
OrthoFinder 1 1.000 - - FOG0001634
OrthoInspector 1 1.000 - - oto18070
orthoMCL 1 0.900 - - OOG6_100351
Panther 1 1.100 - - LDO PTHR11476
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1442
SonicParanoid 1 1.000 - - X1525
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.890

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