DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq1 and FRQ1

DIOPT Version :10

Sequence 1:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_010661.3 Gene:FRQ1 / 851979 SGDID:S000002781 Length:190 Species:Saccharomyces cerevisiae


Alignment Length:188 Identity:109/188 - (57%)
Similarity:139/188 - (73%) Gaps:1/188 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKKSSKLKQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPQGDPSKFA 65
            ||.|:|||.:|.:..|...|||..:||:|||||||:|||:|.|..:.|:||||||||.|.|..||
Yeast     1 MGAKTSKLSKDDLTCLKQSTYFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFA 65

  Fly    66 SLVFRVFDENNDGSIEFEEFIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEMYNIVDAIYQ 130
            :.:|.|||::|:|.|.|||||..||.||:|.|:|||.|||.|||:::|||||.:||..||.::|:
Yeast    66 NHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYK 130

  Fly   131 MVGQQ-PQSEDENTPQKRVDKIFDQMDKNHDGKLTLEEFREGSKADPRIVQALSLGGG 187
            |:|.. ..:|||.||:.||.|||..||||.||.:||:|||||||.||.|:.||:|..|
Yeast   131 MMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGALNLYDG 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_573271.1 EFh 39..89 CDD:415501 28/49 (57%)
FRQ1 <69..173 CDD:444056 62/104 (60%)
FRQ1NP_010661.3 FRQ1 24..174 CDD:444056 89/149 (60%)

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