DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq1 and SOS3

DIOPT Version :10

Sequence 1:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_197815.1 Gene:SOS3 / 832494 AraportID:AT5G24270 Length:222 Species:Arabidopsis thaliana


Alignment Length:202 Identity:60/202 - (29%)
Similarity:107/202 - (52%) Gaps:27/202 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKKSSKLKQDTIDR---------LTTDTYFTEKEIRQWHKGFLK----DCPNGLLTEQGF-IKI 51
            ||...||.|:....|         |.:.|.||.:|:...::.|.|    ...:||:.::.| :.:
plant     1 MGCSVSKKKKKNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLAL 65

  Fly    52 YKQFFPQGDPSKFASLVFRVFDENNDGSIEFEEFIRALSV-TSKGNLDEKLQWAFRLYDVDNDGY 115
            ::.   :...:.||..:|.|||...:|.|||.||:|:|.| .....:.||:::||:|||:...|:
plant    66 FRN---RNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGF 127

  Fly   116 ITREEMYNIVDAIYQMVGQQPQSE---DENTPQKRVDKIFDQMDKNHDGKLTLEEFREGSKADPR 177
            |.|||:..:|.|:..      :||   .|:..:..|||.|.|.|:.:|||:.::|:::....:|.
plant   128 IEREELKEMVVALLH------ESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPS 186

  Fly   178 IVQALSL 184
            :::.::|
plant   187 LIKNMTL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_573271.1 EFh 39..89 CDD:415501 16/50 (32%)
FRQ1 <69..173 CDD:444056 40/107 (37%)
SOS3NP_197815.1 FRQ1 53..181 CDD:444056 45/136 (33%)

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