DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq1 and hpcal4

DIOPT Version :10

Sequence 1:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001072798.1 Gene:hpcal4 / 780259 XenbaseID:XB-GENE-995790 Length:191 Species:Xenopus tropicalis


Alignment Length:185 Identity:101/185 - (54%)
Similarity:136/185 - (73%) Gaps:3/185 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKKSSKLKQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPQGDPSKFA 65
            |||.:|||..:.:..|...|.|:|:|::.|:||||||||:|:|..|.|.::|.:|||.||.||||
 Frog     1 MGKPNSKLAPEMLQDLVQSTEFSEQELKHWYKGFLKDCPSGILNLQEFQQLYIKFFPYGDASKFA 65

  Fly    66 SLVFRVFDENNDGSIEFEEFIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEMYNIVDAIYQ 130
            ...||.||:|.||:|:|.|||.||||||:|:.::||.|||.:||:|.||.|||.||..|::|||:
 Frog    66 QHAFRTFDKNGDGTIDFREFICALSVTSRGSFEQKLNWAFEMYDLDGDGKITRLEMLEIIEAIYK 130

  Fly   131 MVG---QQPQSEDENTPQKRVDKIFDQMDKNHDGKLTLEEFREGSKADPRIVQAL 182
            |||   ....::|..|||:||||||.:|||:.|.::|||||:|.:|:||.||..|
 Frog   131 MVGTVIMMRMNQDGLTPQQRVDKIFAKMDKDRDDQITLEEFKEAAKSDPSIVLLL 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_573271.1 EFh 39..89 CDD:415501 27/49 (55%)
FRQ1 <69..173 CDD:444056 61/106 (58%)
hpcal4NP_001072798.1 FRQ1 21..177 CDD:444056 87/155 (56%)

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