DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq1 and Kcnip1

DIOPT Version :10

Sequence 1:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:XP_006246167.1 Gene:Kcnip1 / 65023 RGDID:70886 Length:245 Species:Rattus norvegicus


Alignment Length:177 Identity:77/177 - (43%)
Similarity:120/177 - (67%) Gaps:1/177 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPQGDPSKFASLVFRVFD 73
            :.:.:::|...|.||::|::..::||..:||:|::.|:.|.:||.||||.||.|.:|..:|..||
  Rat    64 RPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFD 128

  Fly    74 ENNDGSIEFEEFIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQQPQS 138
            ....||::||:|:.|||:..:|.:.|||:|.|.|||::.||||.:|||.:||.|||.|:|:....
  Rat   129 TTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYP 193

  Fly   139 E-DENTPQKRVDKIFDQMDKNHDGKLTLEEFREGSKADPRIVQALSL 184
            . .|:||::.||..|.:||||.||.:||:||.|..:.|..|:::|.|
  Rat   194 VLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQL 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_573271.1 EFh 39..89 CDD:415501 22/49 (45%)
FRQ1 <69..173 CDD:444056 51/104 (49%)
Kcnip1XP_006246167.1 FRQ1 95..230 CDD:444056 64/134 (48%)

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