DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq1 and clxn

DIOPT Version :10

Sequence 1:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001016778.1 Gene:clxn / 549532 XenbaseID:XB-GENE-5727529 Length:208 Species:Xenopus tropicalis


Alignment Length:191 Identity:58/191 - (30%)
Similarity:101/191 - (52%) Gaps:18/191 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKKSSKLKQDTIDRLTTDTYFTEKE----IRQWHKGFLKDCPNGLLTEQG-----FIKIYKQFF 56
            |.:|:.:.:.|.:.||.  .:|::.|    ||.:|.  |...|....|.:|     |..|....|
 Frog     1 MNRKNLQKQADALSRLI--KHFSKNEVESLIRLYHT--LVGRPIDPNTRRGIDRNTFRNILHNTF 61

  Fly    57 PQGDPSKFASLVFRVFDENNDGSIEFEEFIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEM 121
            ...| ......|||.||::||..|...|::..|||..:|.|:|::::.|.:||::.||||:||||
 Frog    62 GMTD-DMIMDRVFRGFDKDNDSYISVTEWVEGLSVFLRGTLEERIKYCFGVYDLNGDGYISREEM 125

  Fly   122 YNIVDAIYQMVGQQPQSEDENTPQKRVDKI-FDQMDKNHDGKLTLEEFREGSKADPRIVQA 181
            :::   :...:.:||..||.:...|.:.:| ..:||.:||.||:..:|.:..:.:..:::|
 Frog   126 FHM---LKNSLLKQPSEEDPDEGVKDLVEIALKKMDYDHDSKLSYMDFEKAVQEENLLLEA 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_573271.1 EFh 39..89 CDD:415501 16/54 (30%)
FRQ1 <69..173 CDD:444056 38/104 (37%)
clxnNP_001016778.1 FRQ1 <66..176 CDD:444056 39/112 (35%)

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