DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq1 and guca1d

DIOPT Version :10

Sequence 1:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001011661.1 Gene:guca1d / 494573 ZFINID:ZDB-GENE-040724-231 Length:185 Species:Danio rerio


Alignment Length:163 Identity:55/163 - (33%)
Similarity:96/163 - (58%) Gaps:11/163 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 KEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPQG---DPSKFASLVFRVFDENNDGSIEFEEFI 86
            :::..|:..|:::.|:||:|   ..::......||   |.:.:...||..||.:.||.|:|.|:|
Zfish    14 EDMHHWYNKFMRESPSGLIT---LFELKSILGLQGMNEDANSYVDQVFCTFDMDRDGYIDFVEYI 75

  Fly    87 RALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQQPQSEDENTPQKRVDKI 151
            .|:|:..||.:::||:|.|:|:|.|.:|.|.::|:..|..||..:...:     :..|::.|..|
Zfish    76 AAISLMLKGEINQKLKWYFKLFDQDGNGKIDKDELETIFTAIQDITRNR-----DIVPEEIVALI 135

  Fly   152 FDQMDKNHDGKLTLEEFREGSKADPRIVQALSL 184
            |:::|.|.:|:||||||.||:|..|.|:..|.:
Zfish   136 FEKIDVNGEGELTLEEFIEGAKEHPEIMDMLKI 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_573271.1 EFh 39..89 CDD:415501 17/52 (33%)
FRQ1 <69..173 CDD:444056 41/103 (40%)
guca1dNP_001011661.1 EFh 28..76 CDD:415501 16/50 (32%)
FRQ1 <53..159 CDD:444056 43/110 (39%)

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