DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Frq1 and LOC4576041

DIOPT Version :10

Sequence 1:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:XP_061513554.1 Gene:LOC4576041 / 4576041 VectorBaseID:AGAMI1_009183 Length:324 Species:Anopheles gambiae


Alignment Length:206 Identity:47/206 - (22%)
Similarity:98/206 - (47%) Gaps:28/206 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKKSSKLKQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPN-------------GLLTEQG----- 47
            |.:.:.||....::.....|:|::.|:....|.:.|...|             |::.:.|     
Mosquito    97 MDELNGKLNPKMLEMYKRRTHFSKVEVEALCKIYRKLVANASMNSKALAASNPGVIAKAGSSMDG 161

  Fly    48 -----FIKIYKQFFPQGDPSKFASLVFRVFDENNDG-SIEFEEFIRALSVTSKGNLDEKLQWAFR 106
                 |.::....|...........:|..:::..:| .|..|.::..||...||:..||..:.||
Mosquito   162 IDRSVFRELLHSTFDIVTEETLMERIFCAWEKGYEGLPIRLEGWLMGLSTFLKGSQAEKTAFCFR 226

  Fly   107 LYDVDNDGYITREEMYNIVDAIYQMVGQQPQSEDENTPQKRVDKI-FDQMDKNHDGKLTLEEFRE 170
            :||:::||:||::||:.:   :...:.:|||.||.:...|.:.:| ..::|.:.|||::.::::|
Mosquito   227 VYDLNSDGFITKDEMFAL---LRNCLIKQPQDEDPDEGVKDLVEIALRKLDMDKDGKISFQDYQE 288

  Fly   171 GSKADPRIVQA 181
            ....:|.:::|
Mosquito   289 AIAEEPLLLEA 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_573271.1 EFh 39..89 CDD:415501 9/73 (12%)
FRQ1 <69..173 CDD:444056 32/105 (30%)
LOC4576041XP_061513554.1 None

Return to query results.
Submit another query.