DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq1 and Guca1a

DIOPT Version :10

Sequence 1:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001100357.1 Gene:Guca1a / 301233 RGDID:1308712 Length:202 Species:Rattus norvegicus


Alignment Length:164 Identity:62/164 - (37%)
Similarity:99/164 - (60%) Gaps:15/164 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EIRQWHKGFLKDCPNGLLTEQGFIKIYKQFF------PQGDPSKFASLVFRVFDENNDGSIEFEE 84
            |..||:|.|:.:||:|.||    :..::|||      |..  |::...:|..||.|.||.|:|.|
  Rat    17 ECHQWYKKFMTECPSGQLT----LYEFRQFFGLKNLSPSA--SQYVEQMFETFDFNKDGYIDFME 75

  Fly    85 FIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQQPQSEDENTPQKRVD 149
            ::.|||:..||.:::||:|.|:|||||.:|.|.|:|:..|:.||..:   .|.|:...:.::..|
  Rat    76 YVAALSLVLKGKVEQKLRWYFKLYDVDGNGCIDRDELLTIIRAIRTI---NPWSDSSMSAEEFTD 137

  Fly   150 KIFDQMDKNHDGKLTLEEFREGSKADPRIVQALS 183
            .:|.::|.|.||:|:||||.||.:.|..::..|:
  Rat   138 TVFAKIDINGDGELSLEEFMEGVQKDQMLLDTLT 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_573271.1 EFh 39..89 CDD:415501 18/55 (33%)
FRQ1 <69..173 CDD:444056 45/103 (44%)
Guca1aNP_001100357.1 FRQ1 31..162 CDD:444056 53/139 (38%)

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