Protein Alignment Frq1 and ncs-3

DIOPT Version :10

• Sequence 1: NP_573271.1
• Gene: Frq1 / 32797
• FlyBaseID: FBgn0030897
• Length: 187
• Species: Drosophila melanogaster
• Sequence 2: NP_508201.2
• Gene: ncs-3 / 186953
• WormBaseID: WBGene00003565
• Length: 199
• Species: Caenorhabditis elegans
• Alignment Length: 195
• Identity: 117/195 - (60%)
• Similarity: 149/195 - (76%)
• Gaps: 11/195 - (5%)

  Fly     1 MGKKSSKL--KQDTIDRLTTD--------TYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQF 55
            |||..||:  |:....:|||:        ||||:||:::|:|.|::|||:|.|..:.|..|||||
 Worm     1 MGKSQSKVQTKKKANKKLTTEEVQTLEQVTYFTKKELKKWYKDFVRDCPSGELKMEEFQGIYKQF 65

  Fly    56 FPQGDPSKFASLVFRVFDENNDGSIEFEEFIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREE 120
            ||.|||||||:.||.|||:|:||.|.|.|||.|||:||:|.|||||.|||.|||||.||:||::|
 Worm    66 FPNGDPSKFAAFVFNVFDDNHDGHISFSEFIAALSITSRGTLDEKLDWAFSLYDVDKDGFITKDE 130

  Fly   121 MYNIVDAIYQMVGQQPQ-SEDENTPQKRVDKIFDQMDKNHDGKLTLEEFREGSKADPRIVQALSL 184
            |.:||||||.|:|...: .:||:||||||:|||..||:|.||:||.|||:|||||||.|||||::
 Worm   131 MADIVDAIYSMIGNMLELPKDEDTPQKRVEKIFTNMDRNLDGQLTREEFKEGSKADPWIVQALTM 195

  Fly   185  184
             Worm   196  195

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Frq1	NP_573271.1	EFh	39..89	CDD:415501	31/49 (63%)
		FRQ1	<69..173	CDD:444056	68/104 (65%)
ncs-3	NP_508201.2	FRQ1	32..184	CDD:444056	96/151 (64%)