DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq1 and Hpcal4

DIOPT Version :10

Sequence 1:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_778163.1 Gene:Hpcal4 / 170638 MGIID:2157521 Length:191 Species:Mus musculus


Alignment Length:185 Identity:100/185 - (54%)
Similarity:139/185 - (75%) Gaps:3/185 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKKSSKLKQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPQGDPSKFA 65
            |||.:|||..:.::.|..:|.|:|:|::||:||||||||:|:|..:.|.::|.:|||.||.||||
Mouse     1 MGKNNSKLAPEVLEDLVQNTEFSEQELKQWYKGFLKDCPSGILNLEEFQQLYIKFFPYGDASKFA 65

  Fly    66 SLVFRVFDENNDGSIEFEEFIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEMYNIVDAIYQ 130
            ...||.||:|.||:|:|.|||.||||||:|:.::||.|||.:||:|.||.|||.||..|::|||:
Mouse    66 QHAFRTFDKNGDGTIDFREFICALSVTSRGSFEQKLNWAFEMYDLDGDGRITRLEMLEIIEAIYK 130

  Fly   131 MVG---QQPQSEDENTPQKRVDKIFDQMDKNHDGKLTLEEFREGSKADPRIVQAL 182
            |||   ....::|..|||:||||||.:||::.|.::|||||:|.:|:||.||..|
Mouse   131 MVGTVIMMRMNQDGLTPQQRVDKIFKKMDQDKDDQITLEEFKEAAKSDPSIVLLL 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_573271.1 EFh 39..89 CDD:415501 26/49 (53%)
FRQ1 <69..173 CDD:444056 60/106 (57%)
Hpcal4NP_778163.1 FRQ1 21..177 CDD:444056 86/155 (55%)

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