DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Frq1 and kcnip1

DIOPT Version :10

Sequence 1:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:XP_002937770.1 Gene:kcnip1 / 100497014 XenbaseID:XB-GENE-973728 Length:230 Species:Xenopus tropicalis


Alignment Length:193 Identity:77/193 - (39%)
Similarity:120/193 - (62%) Gaps:12/193 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KSSKLKQDT-----------IDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFP 57
            ||.|::.:.           :::|...|.|.::|::..::||..:||:|::.|..|..||.||||
 Frog    33 KSDKVEDELEMTTVCYRPEGLEQLEAQTNFNKRELQVLYRGFKNECPSGVVNEDTFKLIYSQFFP 97

  Fly    58 QGDPSKFASLVFRVFDENNDGSIEFEEFIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEMY 122
            .||.|.:|..:|..||....||::||:|:.||||..:|::.|||:|.|.|||::.||.|.:|||.
 Frog    98 HGDASMYAHYLFNAFDAAQSGSVKFEDFVAALSVLLRGSIHEKLRWTFNLYDINKDGNINKEEMM 162

  Fly   123 NIVDAIYQMVGQQPQSE-DENTPQKRVDKIFDQMDKNHDGKLTLEEFREGSKADPRIVQALSL 184
            :||.|||.|:|:..... .|:.|::.|:..|.:||||.||.:||:||.|..:.|..|:::|.|
 Frog   163 DIVKAIYDMMGKYTYPVLKEDAPKQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQL 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_573271.1 EFh 39..89 CDD:415501 22/49 (45%)
FRQ1 <69..173 CDD:444056 49/104 (47%)
kcnip1XP_002937770.1 FRQ1 <104..215 CDD:444056 50/110 (45%)

Return to query results.
Submit another query.