DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq1 and klhl17

DIOPT Version :10

Sequence 1:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:XP_004916201.1 Gene:klhl17 / 100491332 XenbaseID:XB-GENE-977875 Length:627 Species:Xenopus tropicalis


Alignment Length:112 Identity:25/112 - (22%)
Similarity:44/112 - (39%) Gaps:21/112 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPQGDPSKFASLVFR-VFDENNDGSIEF 82
            ||:.....::..||..|          |.|:::.|       ..:|..|..: |.|..:..|:..
 Frog   187 DTHSCSDLLKSAHKYVL----------QHFVEVSK-------TEEFMLLPLKQVLDLISSDSLNV 234

  Fly    83 ---EEFIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEMYNIVD 126
               ||..||:....|.::|.:.|...||........::|:.:.:.||
 Frog   235 PSEEEVYRAVLNWVKHDVDGRRQHVPRLMKCVRLPLLSRDFLMSSVD 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_573271.1 EFh 39..89 CDD:415501 11/53 (21%)
FRQ1 <69..173 CDD:444056 15/62 (24%)
klhl17XP_004916201.1 BTB_POZ_KLHL17_actinfilin 38..176 CDD:349555
PHA03098 77..543 CDD:222983 25/112 (22%)
KELCH repeat 321..360 CDD:276965
KELCH repeat 364..407 CDD:276965
KELCH repeat 411..454 CDD:276965
KELCH repeat 458..502 CDD:276965
KELCH repeat 505..549 CDD:276965
KELCH repeat 552..597 CDD:276965
Kelch 564..608 CDD:128874
Blue background indicates that the domain is not in the aligned region.

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