DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq1 and kcnip4

DIOPT Version :10

Sequence 1:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:XP_002936758.1 Gene:kcnip4 / 100491280 XenbaseID:XB-GENE-5753458 Length:233 Species:Xenopus tropicalis


Alignment Length:178 Identity:76/178 - (42%)
Similarity:120/178 - (67%) Gaps:3/178 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPQGDPSKFASLVFRVFD 73
            :.:.::.|...|.||:||::..::||..:||:|::.|:.|..||.|||||||.|.:|..:|..||
 Frog    52 RPEALELLEAQTKFTKKELQILYRGFKNECPSGIVNEETFKDIYAQFFPQGDASTYAHFLFNAFD 116

  Fly    74 ENNDGSIEFEEFIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQ--QP 136
            .:::||:.||:|:..||...:|.:.|||.|||.|||::.|||||:|||::|:.:||.|:|:  .|
 Frog   117 TDHNGSVSFEDFVIGLSTLLRGTIQEKLNWAFNLYDINKDGYITKEEMFDIMKSIYDMMGKCTYP 181

  Fly   137 QSEDENTPQKRVDKIFDQMDKNHDGKLTLEEFREGSKADPRIVQALSL 184
            ...:| ||::.|:..|.:||.|.||.:|:|||.|..:.|..|:.::.|
 Frog   182 LVREE-TPRQHVENFFQKMDINKDGVVTIEEFIESCQKDENIMCSMQL 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_573271.1 EFh 39..89 CDD:415501 23/49 (47%)
FRQ1 <69..173 CDD:444056 49/105 (47%)
kcnip4XP_002936758.1 EFh 82..129 CDD:415501 22/46 (48%)
FRQ1 <111..218 CDD:444056 49/107 (46%)

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