DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq1 and ncald

DIOPT Version :10

Sequence 1:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001123413.1 Gene:ncald / 100170190 XenbaseID:XB-GENE-948387 Length:193 Species:Xenopus tropicalis


Alignment Length:183 Identity:107/183 - (58%)
Similarity:137/183 - (74%) Gaps:1/183 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKKSSKLKQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPQGDPSKFA 65
            |||::|||:.:.:..|...|.|||.||::|:||||:|||:|.||.:.|.|||..|||.||.||||
 Frog     1 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLTMEEFKKIYGNFFPYGDASKFA 65

  Fly    66 SLVFRVFDENNDGSIEFEEFIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEMYNIVDAIYQ 130
            ..|||.||.|.||:|:|.|||.||||||:|.|::||:|||.:||:|.:|||::.||..||.|||:
 Frog    66 EHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYK 130

  Fly   131 MVGQ-QPQSEDENTPQKRVDKIFDQMDKNHDGKLTLEEFREGSKADPRIVQAL 182
            ||.. ....|||:||:||.:|||.|||.|.||||:||||..|:|:||.||:.|
 Frog   131 MVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRLL 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_573271.1 EFh 39..89 CDD:415501 30/49 (61%)
FRQ1 <69..173 CDD:444056 63/104 (61%)
ncaldNP_001123413.1 FRQ1 21..175 CDD:444056 93/153 (61%)

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