DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Frq1 and kcnip2

DIOPT Version :10

Sequence 1:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:XP_003201187.2 Gene:kcnip2 / 100003947 ZFINID:ZDB-GENE-081031-91 Length:253 Species:Danio rerio


Alignment Length:178 Identity:69/178 - (38%)
Similarity:116/178 - (65%) Gaps:3/178 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPQGDPSKFASLVFRVFD 73
            :.|::|:|...|.||:.|::..::.|..|||.|::.|:.|..||..|||.||.|.:|..:|..||
Zfish    72 RPDSLDKLMELTKFTKTELQILYRSFKNDCPTGVVNEETFQLIYSHFFPHGDSSAYAHFLFEAFD 136

  Fly    74 ENNDGSIEFEEFIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQQ--P 136
            ...:|::.||:|:..||:..:|.:.::|.|||.|||::.||.||:|||.:|:.:||.|:|:.  |
Zfish   137 RRKNGAVNFEDFVVGLSIILRGTVTDRLSWAFSLYDLNKDGCITKEEMNDIMKSIYDMMGKNTCP 201

  Fly   137 QSEDENTPQKRVDKIFDQMDKNHDGKLTLEEFREGSKADPRIVQALSL 184
            ...| :.|::.|:..|.:||:|:||.:|:|||.|..:.|..|::::.:
Zfish   202 CIND-SAPREHVESFFQKMDRNNDGVITMEEFLESCQKDEAIMESMQM 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_573271.1 EFh 39..89 CDD:415501 20/49 (41%)
FRQ1 <69..173 CDD:444056 44/105 (42%)
kcnip2XP_003201187.2 None

Return to query results.
Submit another query.