Protein Alignment unc-4 and repo

DIOPT Version :10

• Sequence 1: NP_573242.2
• Gene: unc-4 / 32757
• FlyBaseID: FBgn0024184
• Length: 588
• Species: Drosophila melanogaster
• Sequence 2: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Alignment Length: 547
• Identity: 128/547 - (23%)
• Similarity: 195/547 - (35%)
• Gaps: 177/547 - (32%)

  Fly    53 SNSIPNAHRTNAGQHLLGGSPSSACSTSVSGCGMPSEGLHPTAALQLYAAAAQLAPNGVRVPPWG 117
            |:|..:.:.....|||.||||.     .:......|:||     ||   .::.:..||
  Fly   173 SSSPKDQYEPQQLQHLYGGSPH-----HLDHLDHGSDGL-----LQ---DSSPVMING------- 217

  Fly   118 PFLQFGVPGVFGPNGPFLGRP-----RFDAASAGGHPNSAAAAAAATQMAAVNASNAFANLTGLS 177
                       |..|..|.:|     :.:|..||..|.|:::...          |...|.||.:
  Fly   218 -----------GSAGGKLKKPDEMCSQLEAGGAGVTPPSSSSTVV----------NGTTNGTGNA 261

  Fly   178 AAALRNVSAAQTTAVAAVASTVATIQHRLMIGNRQSLPPAGPPSEGSNEDGGFPGDGDDDSSAAK 242
                 |.|::....:...|.|...:          :.|.|......|.:.|        |.:..|
  Fly   262 -----NSSSSAGVGIQGAAGTAGGV----------AAPAAKKDGSSSKKKG--------DPNGIK 303

  Fly   243 RRRSRTNFNSWQLEELERAFSASHYPDIFMREALAMRLDLKESRVAVWFQNRRAKVRKREHTKK- 306
            ::::||.|.::|||||||||..:.|||:|.||.||::|:|.||||.|||||||||.||.|..:|
  Fly   304 KKKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHEPPRKT 368

  Fly   307 -------------GPG--RPAHNAQPQTCSGEPIPPNELKAKERARRRKKLAKAIDRQARKLQAK 356
                         .||  .|...:.|||.:  ..||..:.:....:...:|......
  Fly   369 GYIKTSTPPTATLNPGTLAPPFTSYPQTTT--VTPPGSMDSWTSYQTPYELTPQFSL-------- 423

  Fly   357 GITVDLEALKAEYISQHKANGTFSDSDLEDDGIQIDVVGGTDSDDEGDSDAV------------- 408
                 |....:.|       ||:|                      |...|.
  Fly   424 -----LSPAASPY-------GTYS----------------------GQYGAYVHESQLFPMRHYE 454

  Fly   409 --SPVRLGGGGGGGGGTGGGGGGGASSSLHCGLDGDGDSSRAGSFIGGGGSLGSPS-SVAPPSML 470
              ||.|:..|...|                 .:.|:||.|     :..|||..:.. ..|....|
  Fly   455 YGSPTRMEMGATTG-----------------SVAGNGDES-----VANGGSYQTAELQTAQQQQL 497

  Fly   471 SNGAVQFGKLEPMDGNESEERDRERDSPKPLLFPAKAFHQLNLQSSQQHHGLVVGQGQGSGSGHG 535
            ::|.     |..:..::.:::.:::.:.|.|  .|:....::||..|...||.:..|   .|.|.
  Fly   498 ADGT-----LVTVHAHQQQQQQQQQLNGKYL--SAEEAKYVHLQCHQSGGGLELSPG---ASCHL 552

  Fly   536 HGHQHNHHQHHLHHGSASASAAAAVAN 562
            ...|..|:......|:|||...::..|
  Fly   553 VEAQGQHYVTTATGGAASAGGTSSDDN 579

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
unc-4	NP_573242.2	Homeodomain	244..300	CDD:459649	35/55 (64%)
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	32/47 (68%)