DRSC/TRiP Functional Genomics Resources

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Protein Alignment unc-4 and gsb-n

DIOPT Version :10

Sequence 1:NP_573242.2 Gene:unc-4 / 32757 FlyBaseID:FBgn0024184 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster


Alignment Length:112 Identity:48/112 - (42%)
Similarity:58/112 - (51%) Gaps:28/112 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 AGPPSEGS-----------NEDG-------GFPGDGDDDSS----------AAKRRRSRTNFNSW 253
            |.|||..|           :|||       |..|..|.|.|          ..|:|||||.|.:.
  Fly   128 ADPPSTSSISRLLRGSDRGSEDGRKDYTINGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAE 192

  Fly   254 QLEELERAFSASHYPDIFMREALAMRLDLKESRVAVWFQNRRAKVRK 300
            |||.||||||.:.|||::.||.||....|.|:|:.|||.||||::||
  Fly   193 QLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRK 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-4NP_573242.2 Homeodomain 244..300 CDD:459649 32/55 (58%)
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199 5/12 (42%)
Homeodomain 183..239 CDD:459649 32/55 (58%)

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