DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAPp190 and AT5G19390

DIOPT Version :10

Sequence 1:NP_001259658.1 Gene:RhoGAPp190 / 32743 FlyBaseID:FBgn0026375 Length:1621 Species:Drosophila melanogaster
Sequence 2:NP_197440.2 Gene:AT5G19390 / 832059 AraportID:AT5G19390 Length:870 Species:Arabidopsis thaliana


Alignment Length:214 Identity:51/214 - (23%)
Similarity:83/214 - (38%) Gaps:37/214 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  1387 EQEKKLKRKLKQNAKGLVESAEAQFGK--LMITSEQGEIPIFLNKCVEFIEKEGLDSEGIYRVPG 1449
            |..:.::.:.|:..|.||      .|:  |:...:....|.||.|.::||||.|...|||.|...
plant   143 ETNEAIEGREKRPLKSLV------VGRPILLALEDIDGSPSFLEKALQFIEKYGTKIEGILRQSA 201

  Fly  1450 SRAHVDMLFQRFEEDTNTEIDALDIPVNAVATALKDFFSKRLPPLFSKDIIKELEEIAGSRGVGN 1514
            ....|:...|.:|:. .||. ..|...:.|...:             |.:::||.....|.....
plant   202 DVEEVERRVQEYEQG-KTEF-TFDEDPHVVGDCI-------------KHVLRELPSSPVSASCCT 251

  Fly  1515 SKLNVEVKTDRSCRLIALKS-LLQKLPPINFAILKYIFQHFVHVSDNSKLNSMDSKNLAICWWPT 1578
            :.|.......:..|:.:|:| :.:..|..|..:|:.|.:....:|.:|..|.|:...:|.|..|.
plant   252 ALLEAYRIESKEARISSLRSAIAETFPEPNRRLLQRILKMMHTISSHSHENRMNPNAVAACMAPL 316

  Fly  1579 LIPIDFTDMGHFEQLRPYL 1597
            |             |||.|
plant   317 L-------------LRPLL 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAPp190NP_001259658.1 P-loop containing Nucleoside Triphosphate Hydrolases <148..238 CDD:476819
RhoGAP-FF1 254..333 CDD:465153
pseudoGTPaseD_p190RhoGAP 598..748 CDD:412064
RhoGAP_p190 1411..1611 CDD:239838 46/190 (24%)
AT5G19390NP_197440.2 PH 19..125 CDD:459697
RhoGAP 176..313 CDD:459875 37/151 (25%)
Smc <570..>744 CDD:440809
Lzipper-MIP1 609..687 CDD:464163
Blue background indicates that the domain is not in the aligned region.

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