DRSC/TRiP Functional Genomics Resources

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Protein Alignment stas and Tmem41b

DIOPT Version :10

Sequence 1:NP_573225.1 Gene:stas / 32737 FlyBaseID:FBgn0030850 Length:320 Species:Drosophila melanogaster
Sequence 2:XP_063123491.1 Gene:Tmem41b / 361626 RGDID:1310870 Length:297 Species:Rattus norvegicus


Alignment Length:197 Identity:87/197 - (44%)
Similarity:117/197 - (59%) Gaps:16/197 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 EKKATKKSLVIVAGIFVASLVTMCYVYAIFPELNASEKQHLKIPRDIQDAKMLAKVLDRYKDMYY 138
            |..:.:.||:|:..||..:...|..||..||:|:..|:.::|:|||:.|||.|.|||.:|||.:|
  Rat    46 EAGSARTSLLILVSIFSCAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFY 110

  Fly   139 FEVMFGVVVAYVFLQTFAIPGSLFLSILLGFLYKFPIALFLICFCSALGATLCYTLSNLVGRRLI 203
            .:|:......|:||||||||||:|||||.||||.||:||||:|.||.|||:.||.||.||||.::
  Rat   111 VQVLVAYFATYIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVV 175

  Fly   204 RHFWPKKTSEWSKHVEEYRDSLFNYMLFLRMTPIL---------PNWFINLA-SPVIGVPLHIFA 258
            ..:..:|..:||:.|      ..|:.|||..:.:|         .|.|.||. ...|...|.||.
  Rat   176 YKYLTEKAVKWSQQV------AINFSLFLCGSLVLSSFKRIMLQENCFKNLVFENFIQYVLIIFT 234

  Fly   259 LG 260
            .|
  Rat   235 YG 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stasNP_573225.1 TVP38 142..320 CDD:440167 58/129 (45%)
Tmem41bXP_063123491.1 None

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