DRSC/TRiP Functional Genomics Resources

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Protein Alignment Chchd2 and chchd10

DIOPT Version :10

Sequence 1:NP_573196.1 Gene:Chchd2 / 32701 FlyBaseID:FBgn0260747 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_957078.1 Gene:chchd10 / 393757 ZFINID:ZDB-GENE-040426-1753 Length:143 Species:Danio rerio


Alignment Length:151 Identity:72/151 - (47%)
Similarity:89/151 - (58%) Gaps:20/151 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RTAPVQARAPAPAPAPVQTRAPAPAASAPVPAPMSAPPSAVGMPAPQQPSMFQQMAATAGGVAVG 80
            |:.|    :||||.||..:.||||||    |.||:..|:|.   .|:||.:..|||.||.|||||
Zfish     6 RSRP----SPAPASAPAPSYAPAPAA----PPPMAVAPAAA---QPKQPGLMAQMATTAAGVAVG 59

  Fly    81 SAIGHTVGHGLTSLFSGSGDKEAAAPAPAAAAPAPQQPYYAQQQQPNEPQGACAWELKQFIQCAQ 145
            ||:||.:|..:|..|||....||..|||.         |....:.|....|.|.:|::||:.||.
Zfish    60 SAVGHVMGSAITGAFSGGSSSEAPKPAPT---------YQEPSRLPPSQSGPCLFEVRQFLDCAT 115

  Fly   146 GQADLTLCEGFNEALRQCKQS 166
            .||||:|||||||||:|||.|
Zfish   116 TQADLSLCEGFNEALKQCKLS 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Chchd2NP_573196.1 CHCH 133..165 CDD:429096 21/31 (68%)
chchd10NP_957078.1 COG3416 <44..>87 CDD:442642 22/42 (52%)
CHCH 103..134 CDD:429096 20/30 (67%)

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