DRSC/TRiP Functional Genomics Resources

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Protein Alignment sphe and modSP

DIOPT Version :10

Sequence 1:NP_573148.2 Gene:sphe / 32648 FlyBaseID:FBgn0030774 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster


Alignment Length:206 Identity:50/206 - (24%)
Similarity:80/206 - (38%) Gaps:35/206 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GGEDADATATTFTASLRV-----DNAHVCGGSILSQTKILTTAHCVHRDGKLIDASRLACRVGST 87
            ||...:.|...:...|.|     |....||||:|:...::|.||||:.:|..:..|....||.:.
  Fly   371 GGYTINNTVVPWHVGLYVWHNEKDYHFQCGGSLLTPDLVITAAHCVYDEGTRLPYSYDTFRVIAA 435

  Fly    88 NQYAG-------GKIVNVESVAVHPDY----YNLNNNLAVITLSS--ELTYTDRITAIPLVASGE 139
            ..|..       .|..:|..:.:.|.|    .|...:||::||..  ||::..|...:...:..|
  Fly   436 KFYRNYGETTPEEKRRDVRLIEIAPGYKGRTENYYQDLALLTLDEPFELSHVIRPICVTFASFAE 500

  Fly   140 ALPAEGSEVIV-------AGWGRTSDGTNSYKIRQISLKVAPEATCLDAYSDHDEQSFCLAHELK 197
                  .|.:.       |||    :..|.::::.:.......:.|.....|.....||:..:.|
  Fly   501 ------KESVTDDVQGKFAGW----NIENKHELQFVPAVSKSNSVCRRNLRDIQADKFCIFTQGK 555

  Fly   198 EGTCHGDGGGG 208
            ...|.||.|||
  Fly   556 SLACQGDSGGG 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spheNP_573148.2 Tryp_SPc 42..247 CDD:238113 47/192 (24%)
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 50/206 (24%)
Blue background indicates that the domain is not in the aligned region.

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