DRSC/TRiP Functional Genomics Resources

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Protein Alignment r and pyrB

DIOPT Version :10

Sequence 1:NP_523377.1 Gene:r / 32640 FlyBaseID:FBgn0003189 Length:2224 Species:Drosophila melanogaster
Sequence 2:NP_418666.1 Gene:pyrB / 948767 ECOCYCID:EG10805 Length:311 Species:Escherichia coli


Alignment Length:311 Identity:135/311 - (43%)
Similarity:196/311 - (63%) Gaps:10/311 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly  1911 VAHSLMGKHILAVDMFNKDHLNDIFNLAQLLKLRGTKDRPVDELLPGKIMASVFYEVSTRTQCSF 1975
            :|:.|..|||::::..::|.||.:  ||...||   |..|..|||..|::||.|:|.||||:.||
E. coli     1 MANPLYQKHIISINDLSRDDLNLV--LATAAKL---KANPQPELLKHKVIASCFFEASTRTRLSF 60

  Fly  1976 AAAMLRLGGRVISMDNI--TSSVKKGESLEDSIKVVSSYADVVVLRHPSPGAVARAATFS-RKPL 2037
            ..:|.|||..|:...:.  ||..||||:|.|:|.|:|:|.|.:|:|||..||...|..|| ..|:
E. coli    61 ETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDAIVMRHPQEGAARLATEFSGNVPV 125

  Fly  2038 INAGDGVGEHPTQALLDIFTIREEFGTVNGLTITMVGDLKNGRTVHSLARLLTLYNVN-LQYVAP 2101
            :|||||..:||||.|||:|||:|..|.::.|.:.||||||.|||||||.:.|..::.| ..::||
E. coli   126 LNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAP 190

  Fly  2102 NSLQMPDEVVQFVHQRGVKQLFARDLKNVLPDTDVLYMTRIQRERFDNVEDYEKCCGHLVLTPEH 2166
            ::|.||..::..:.::|:.......::.|:.:.|:|||||:|:||.|..| |.......||....
E. coli   191 DALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPSE-YANVKAQFVLRASD 254

  Fly  2167 MMRAKKRSIVLHPLPRLNEISREIDSDPRAAYFRQAEYGMYIRMALLAMVV 2217
            :..||....|||||||::||:.::|..|.|.||:||..|::.|.||||:|:
E. coli   255 LHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVL 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rNP_523377.1 CPSaseIIsmall 7..376 CDD:273580
CPSaseII_lrg 403..1455 CDD:273581
CAD_DHOase 1475..1821 CDD:238641
PyrB 1913..2221 CDD:440306 134/309 (43%)
pyrBNP_418666.1 asp_carb_tr 8..306 CDD:273209 133/304 (44%)
Blue background indicates that the domain is not in the aligned region.

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