DRSC/TRiP Functional Genomics Resources

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Protein Alignment r and CPA1

DIOPT Version :10

Sequence 1:NP_523377.1 Gene:r / 32640 FlyBaseID:FBgn0003189 Length:2224 Species:Drosophila melanogaster
Sequence 2:NP_014947.3 Gene:CPA1 / 854479 SGDID:S000005829 Length:411 Species:Saccharomyces cerevisiae


Alignment Length:387 Identity:176/387 - (45%)
Similarity:238/387 - (61%) Gaps:24/387 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASTDCYLALEDGTVLPGYSFGYVPSENESKVGFGGEVVFQTGMVGYTEALTDRSYSGQILVLTYP 66
            |:|.....:::|....|.|||    .|:|   ..||.||.|.:|||.|::||.||.|||||.|.|
Yeast     4 AATKATFCIQNGPSFEGISFG----ANKS---VAGETVFTTSLVGYPESMTDPSYRGQILVFTQP 61

  Fly    67 LIGNYGVPAPD-EDEHGLPLHFEWMKGVVQATALVVGEVAEEAFHWRKWKTLPDWLKQHKVPGIQ 130
            ||||||||:.: .||:.|..:||  ...:....:||.|.|.:..||...::|..|.::..|..|.
Yeast    62 LIGNYGVPSGEARDEYNLLKYFE--SPHIHVVGIVVAEYAYQYSHWTAVESLAQWCQREGVAAIT 124

  Fly   131 DIDTRALTKKLREQGSMLGKI-VYEKPPVEGLPKSSFVDPNVRNLAKECSVKER-QVYGNPNGKG 193
            .:|||.|.:.||||||.||:| :.:..||      .:|:|...||..:.:.|:. .|...|....
Yeast   125 GVDTRELVQYLREQGSSLGRITLADHDPV------PYVNPMKTNLVAQVTTKKPFHVSALPGKAK 183

  Fly   194 PRIAILDCGLKLNQLRCLLQRGASVTLLPWSARLED--EQFDALFLSNGPGNPESCDQIVQQVRK 256
            ..:|::|||:|.|.:|||::|||:||:.|:..|::|  .:||.:||||||||||.|...:..||:
Yeast   184 ANVALIDCGVKENIIRCLVKRGANVTVFPYDYRIQDVASEFDGIFLSNGPGNPELCQATISNVRE 248

  Fly   257 VIEEGQK---PVFGICLGHQLLAKAIGCSTYKMKYGNRGHNLPCLHRATGRCLMTSQNHGYAVDL 318
            ::.....   |:|||||||||||.|.|.||:|:|||||.||:|.:...||:|.:||||||||||.
Yeast   249 LLNNPVYDCIPIFGICLGHQLLALASGASTHKLKYGNRAHNIPAMDLTTGQCHITSQNHGYAVDP 313

  Fly   319 EQLP-DGWSELFVNANDGTNEGIVHASKPYFSVQFHPEHHAGPQDTEFLFDVFMESIQQKDL 379
            |.|| |.|...|||.||.:|||::|..:|.||.|||||...||.||..|||.|.::|::..|
Yeast   314 ETLPKDQWKPYFVNLNDKSNEGMIHLQRPIFSTQFHPEAKGGPLDTAILFDKFFDNIEKYQL 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rNP_523377.1 CPSaseIIsmall 7..376 CDD:273580 173/377 (46%)
CPSaseII_lrg 403..1455 CDD:273581
CAD_DHOase 1475..1821 CDD:238641
PyrB 1913..2221 CDD:440306
CPA1NP_014947.3 CPSaseIIsmall 8..372 CDD:273580 173/378 (46%)
Blue background indicates that the domain is not in the aligned region.

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