DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Db and Spn88Eb

DIOPT Version :10

Sequence 1:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster


Alignment Length:386 Identity:95/386 - (24%)
Similarity:169/386 - (43%) Gaps:52/386 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FKLNLLELVMDKAES-NFIASPLCIEIGISMILMGAKGTTAEELRSVLDLPVDVTEMAKKYERIM 86
            |.|.|::.:.:...| |...||......:.:....:...|..||...|:|     ..|...::::
  Fly    41 FSLALMKQIREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNL-----GWALNKQQVL 100

  Fly    87 SNF---QKHNGLRF---------TNWLYVNETYEVRQDYNTLM-KSTFMAEGK-DPLSQRKASNS 137
            .::   |:.:..|:         .|.::|:.|..|...:|||: .:|...:.| ||.:..|..|.
  Fly   101 VSYTLAQRQDEFRWRQSPMELSSANRIFVDRTINVSNKFNTLLYGATKELDFKNDPETGLKEIND 165

  Fly   138 ISFSIHRKSHKGMRTISNDHNLQINESAVLVNTVYYSGAWKTRFSKKDTKLKVFHGDHNKKVYVR 202
               .|..|:|..:|.:.:...:..:...||.|..|..|.|.::|..::|.||.|..:..::..|.
  Fly   166 ---WIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFINEREQEMVY 227

  Fly   203 MMSHVGRFR--IADHSYGQIIEMPF---------------DNSDLSMIIGLPLHNTYLSSIEKIL 250
            ||...|.|:  |.:....|||::|:               ..||:||||.||  |:...|:.:::
  Fly   228 MMHKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPESKSDISMIIILP--NSNKISLNRVI 290

  Fly   251 RTLS--------ESLVENNVHVELPKFKIKYQTELVESLKKLGIHLIFSNTSDLSGLLTNGTGAK 307
            ..|:        |..:...:.:.||||:.:.:.||...|..:|::.:|:..:....|..:.....
  Fly   291 SRLNADSVKKWFERALPQKIELSLPKFQFEQRLELTPILSLMGVNTMFTRNATFGDLTADPISLV 355

  Fly   308 INHVVHKSFIEINERGASTGEASDHAESIQKKTRASTSFKVNRPFVFLIRDK--HTVYFRG 366
            |:...|.:.|:::|.|::...|:....|...:....|.|..|.||||||.|:  .|:.|.|
  Fly   356 IDDAQHLAKIKVDEVGSTAAAATILLVSRSSRQPDPTKFNCNHPFVFLIYDEKVDTILFAG 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DbNP_001356884.1 serpin 18..370 CDD:476815 95/386 (25%)
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 95/386 (25%)

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