DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33096 and Bem46

DIOPT Version :10

Sequence 1:NP_001356926.1 Gene:CG33096 / 326251 FlyBaseID:FBgn0053096 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_477372.1 Gene:Bem46 / 44441 FlyBaseID:FBgn0025109 Length:338 Species:Drosophila melanogaster


Alignment Length:289 Identity:69/289 - (23%)
Similarity:114/289 - (39%) Gaps:64/289 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PEPTYKLTPADDTNIRYNLQLFDRAEWQYSEREKSKVEAFFTRTSRGNLITCIYVRCSKNAKYTL 93
            |..|..:...||..:        .|.|.....|:||                        :..||
  Fly    79 PHITVSIKTPDDVTL--------HAFWVTQPEERSK------------------------SSPTL 111

  Fly    94 LFSHGNAVDLGQMSSFYLTLGSQINCNIFGYDYSGYGMSGGKPSEKNLYADIEAAWQAMRTRFNI 158
            |:.||||.::|........:...::||:...:|.|||:|.|.|:|:.|..|..||...:.||.::
  Fly   112 LYFHGNAGNMGHRMQNVWGIYHHLHCNVLMVEYRGYGLSTGVPTERGLVTDARAAIDYLHTRHDL 176

  Fly   159 SPETIILYGQSIGTVPTVDLA-------------------SRHEVGAVILHSPLMSGLRVVFRNT 204
            ....:||:|:|:|....||:|                   |..|:...::|..:.....::|:| 
  Fly   177 DHSQLILFGRSLGGAVVVDVAADTVYGQKLMCAIVENTFSSIPEMAVELVHPAVKYIPNLLFKN- 240

  Fly   205 KRTWFFDAFPSIDKVAKVKAPVLVIHGTDDEVIDFSHGIGIYERCPKTVEPFW-VEGAGHNDVEL 268
                   .:.|:.|:.|...|.|.|.|..|.::.......:|.:|...::... ..|..|||..:
  Fly   241 -------KYHSMSKIGKCSVPFLFISGLADNLVPPRMMRALYTKCGSEIKRLLEFPGGSHNDTWI 298

  Fly   269 HPHYYERLRKFLS----VELVKXQLKNNV 293
            ...||:.:..||:    ..|:| ..|:||
  Fly   299 VDGYYQAIGGFLAELQQQPLLKAPEKSNV 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33096NP_001356926.1 FrsA 57..280 CDD:440691 56/242 (23%)
Bem46NP_477372.1 FrsA 73..312 CDD:440691 64/272 (24%)

Return to query results.
Submit another query.