Protein Alignment Ubi-p5E and MDY2

DIOPT Version :10

• Sequence 1: NP_727078.1
• Gene: Ubi-p5E / 326237
• FlyBaseID: FBgn0086558
• Length: 534
• Species: Drosophila melanogaster
• Sequence 2: NP_014530.1
• Gene: MDY2 / 854038
• SGDID: S000005471
• Length: 212
• Species: Saccharomyces cerevisiae
• Alignment Length: 237
• Identity: 49/237 - (20%)
• Similarity: 87/237 - (36%)
• Gaps: 52/237 - (21%)

  Fly     6 KTLTGKTIT------LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
            |.||..|:|      ...:|...:.|:        |:|....:..:...:.:..:...|...|..
Yeast    15 KFLTLATLTEPKLPKSYTKPLKDVTNL--------GVPLPTLKYKYKQNRAKKLKLHQDQQGQDN 71

  Fly    65 STLHLVLRLRGGMQIFVKTLTGK-TITLEVEPSDTIENVKAK-IQDKEGIPPDQQRLIFAGKQLE 127
            :.:||.|:         |....| :|..:..|||||..:|.. |.:::.....:.:|:..||.|.
Yeast    72 AAVHLTLK---------KIQAPKFSIEHDFSPSDTILQIKQHLISEEKASHISEIKLLLKGKVLH 127

  Fly   128 DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI-ENVKAKIQDKEGIPPD 191
            |...|||..:                     |....|||:.::|:.|| :..:|:.......|..
Yeast   128 DNLFLSDLKV---------------------TPANSTITVMIKPNPTISKEPEAEKSTNSPAPAP 171

  Fly   192 QQRLIFAGKQLEDGRTLSDYNIQKE--STLHLVLRLRGGMQI 231
            .|.|......:|   .|...|.:.:  :...::.||:.|..:
Yeast   172 PQELTVPWDDIE---ALLKNNFENDQAAVRQVMERLQKGWSL 210

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubi-p5E	NP_727078.1	Ubl_ubiquitin	1..76	CDD:340501	14/75 (19%)
		Ubl_ubiquitin	77..152	CDD:340501	18/76 (24%)
		Ubl_ubiquitin	153..228	CDD:340501	16/77 (21%)
		Ubl_ubiquitin	229..304	CDD:340501	0/3 (0%)
		Ubl_ubiquitin	305..380	CDD:340501
		Ubl_ubiquitin	381..456	CDD:340501
		Ubl_ubiquitin	457..532	CDD:340501
MDY2	NP_014530.1	Get5_bdg	8..59	CDD:407090	9/51 (18%)
		Ubl_Rad23	74..148	CDD:340503	25/103 (24%)
		Get5_C	174..212	CDD:408303	7/40 (18%)