DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p5E and UBQ9

DIOPT Version :10

Sequence 1:NP_727078.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_568552.1 Gene:UBQ9 / 833742 AraportID:AT5G37640 Length:322 Species:Arabidopsis thaliana


Alignment Length:305 Identity:265/305 - (86%)
Similarity:282/305 - (92%) Gaps:1/305 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            |||..||||.||||::|..||||.||||||||.||||.|||||||:||.|:|||||:||:|||:|
plant     3 MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKDS 67

  Fly    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130
            .|||.||||||||||||||||||||||||.||||:|||||||||||:||||||||||||||:|||
plant    68 ILHLALRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGR 132

  Fly   131 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195
            ||:||||||||||||||||||||||||:|||.|||.||||.|||.:|||||||||||||||||||
plant   133 TLADYNIQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRL 197

  Fly   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 260
            |||||||||||||:||||||||||||||||.|||||||.||||||||||||.||||:||||||||
plant   198 IFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKAKIQD 262

  Fly   261 KEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLVLRLRGG 304
            ||.|.||||||||||:||||| .||:|||||||||||||||||||
plant   263 KERIQPDQQRLIFAGEQLEDGYYTLADYNIQKESTLHLVLRLRGG 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p5ENP_727078.1 Ubl_ubiquitin 1..76 CDD:340501 56/74 (76%)
Ubl_ubiquitin 77..152 CDD:340501 69/74 (93%)
Ubl_ubiquitin 153..228 CDD:340501 66/74 (89%)
Ubl_ubiquitin 229..304 CDD:340501 66/75 (88%)
Ubl_ubiquitin 305..380 CDD:340501 265/305 (87%)
Ubl_ubiquitin 381..456 CDD:340501
Ubl_ubiquitin 457..532 CDD:340501
UBQ9NP_568552.1 Ubl1_cv_Nsp3_N-like 3..78 CDD:475130 56/74 (76%)
Ubl_ubiquitin 79..154 CDD:340501 69/74 (93%)
Ubl_ubiquitin 155..230 CDD:340501 66/74 (89%)
Ubl1_cv_Nsp3_N-like 231..307 CDD:475130 66/75 (88%)
Blue background indicates that the domain is not in the aligned region.

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