DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p5E and UBQ1

DIOPT Version :10

Sequence 1:NP_727078.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_566969.1 Gene:UBQ1 / 824425 AraportID:AT3G52590 Length:128 Species:Arabidopsis thaliana


Alignment Length:78 Identity:74/78 - (94%)
Similarity:76/78 - (97%) Gaps:0/78 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 521
            ||||||||||||||||||.||||:||||||||||||||||||||||||||||||||:||||||||
plant     1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 65

  Fly   522 TLHLVLRLRGGAI 534
            |||||||||||.|
plant    66 TLHLVLRLRGGII 78

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p5ENP_727078.1 Ubl_ubiquitin 1..76 CDD:340501
Ubl_ubiquitin 77..152 CDD:340501
Ubl_ubiquitin 153..228 CDD:340501
Ubl_ubiquitin 229..304 CDD:340501
Ubl_ubiquitin 305..380 CDD:340501
Ubl_ubiquitin 381..456 CDD:340501
Ubl_ubiquitin 457..532 CDD:340501 71/74 (96%)
UBQ1NP_566969.1 Ubl_ubiquitin 1..76 CDD:340501 71/74 (96%)
Ribosomal_L40e 79..126 CDD:395807 74/78 (95%)
Blue background indicates that the domain is not in the aligned region.

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