DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p5E and CG11700

DIOPT Version :10

Sequence 1:NP_727078.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_572306.1 Gene:CG11700 / 31564 FlyBaseID:FBgn0029856 Length:301 Species:Drosophila melanogaster


Alignment Length:296 Identity:269/296 - (90%)
Similarity:283/296 - (95%) Gaps:0/296 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            ||||||||||||||||||||||||||||||||||..||:.|||||.||.||:|||||||||||||
  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKES 65

  Fly    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130
            |::||||||||||||||||||||||||||||||||||||||||||..||:.|||||.||.||:||
  Fly    66 TIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGR 130

  Fly   131 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195
            ||||||||||||::|||||||||||||||||||||||||||||:||||||:|.||||||||||||
  Fly   131 TLSDYNIQKESTIYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRL 195

  Fly   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||::|||:|.|
  Fly   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIKHVKARIHD 260

  Fly   261 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 296
            |:|||||.||||||||||||||||||||||||||||
  Fly   261 KDGIPPDHQRLIFAGKQLEDGRTLSDYNIQKESTLH 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p5ENP_727078.1 Ubl_ubiquitin 1..76 CDD:340501 65/74 (88%)
Ubl_ubiquitin 77..152 CDD:340501 65/74 (88%)
Ubl_ubiquitin 153..228 CDD:340501 71/74 (96%)
Ubl_ubiquitin 229..304 CDD:340501 62/68 (91%)
Ubl_ubiquitin 305..380 CDD:340501
Ubl_ubiquitin 381..456 CDD:340501
Ubl_ubiquitin 457..532 CDD:340501
CG11700NP_572306.1 Ubl1_cv_Nsp3_N-like 1..76 CDD:475130 65/74 (88%)
Ubl1_cv_Nsp3_N-like 77..152 CDD:475130 65/74 (88%)
Ubl_ubiquitin 153..228 CDD:340501 71/74 (96%)
Ubl1_cv_Nsp3_N-like 229..296 CDD:475130 60/66 (91%)
Blue background indicates that the domain is not in the aligned region.

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