DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p5E and Fau

DIOPT Version :10

Sequence 1:NP_727078.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster
Sequence 2:XP_063144026.1 Gene:Fau / 29752 RGDID:61938 Length:188 Species:Rattus norvegicus


Alignment Length:78 Identity:28/78 - (35%)
Similarity:44/78 - (56%) Gaps:2/78 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 521
            ||:||:  ..:..||||...:|:..:||.:...|||.|:.|.::.||..|||..||....::..:
  Rat     1 MQLFVR--AQELHTLEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGSPLEDEATLGQCGVEALT 63

  Fly   522 TLHLVLRLRGGAI 534
            ||.:..|:.||.:
  Rat    64 TLEVAGRMLGGKV 76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p5ENP_727078.1 Ubl_ubiquitin 1..76 CDD:340501
Ubl_ubiquitin 77..152 CDD:340501
Ubl_ubiquitin 153..228 CDD:340501
Ubl_ubiquitin 229..304 CDD:340501
Ubl_ubiquitin 305..380 CDD:340501
Ubl_ubiquitin 381..456 CDD:340501
Ubl_ubiquitin 457..532 CDD:340501 26/74 (35%)
FauXP_063144026.1 None
Blue background indicates that the domain is not in the aligned region.

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