DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p5E and AT1G53980

DIOPT Version :10

Sequence 1:NP_727078.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001319221.1 Gene:AT1G53980 / 28717352 AraportID:AT1G53980 Length:91 Species:Arabidopsis thaliana


Alignment Length:119 Identity:42/119 - (35%)
Similarity:49/119 - (41%) Gaps:40/119 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            |:|.:||..||||.||                                 |||.....|..|..|.
plant     1 MKILIKTEKGKTINLE---------------------------------LEDSSETIDIKIHAEP 32

  Fly    66 TLHLVLRLRGG-----MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 114
            |..|||.|..|     |.|||.||.|||..|||:.|:.|:.||..|.|:  :||
plant    33 TRQLVLGLGQGPQGEMMSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p5ENP_727078.1 Ubl_ubiquitin 1..76 CDD:340501 21/74 (28%)
Ubl_ubiquitin 77..152 CDD:340501 20/38 (53%)
Ubl_ubiquitin 153..228 CDD:340501
Ubl_ubiquitin 229..304 CDD:340501
Ubl_ubiquitin 305..380 CDD:340501
Ubl_ubiquitin 381..456 CDD:340501
Ubl_ubiquitin 457..532 CDD:340501
AT1G53980NP_001319221.1 Ubl1_cv_Nsp3_N-like 49..>87 CDD:475130 20/38 (53%)
Blue background indicates that the domain is not in the aligned region.

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