DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p5E and F52C6.4

DIOPT Version :10

Sequence 1:NP_727078.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001379809.1 Gene:F52C6.4 / 186086 WormBaseID:WBGene00018661 Length:100 Species:Caenorhabditis elegans


Alignment Length:182 Identity:51/182 - (28%)
Similarity:72/182 - (39%) Gaps:82/182 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            |.:.|||.||||||:|..     :|||.:::||:|:       :|.                   
 Worm     1 MLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV-------VFT------------------- 34

  Fly    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130
                         :....:||..||  ||.||.|:::..|:.:.:..|                 
 Worm    35 -------------VSYGEVTGDPIT--VEASDAIKDLNFKVAEAQRKP----------------- 67

  Fly   131 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 182
                         |     |.||:|:|||.. |||||:...||||.:|||||
 Worm    68 -------------H-----REGMRIYVKTCE-KTITLDTAASDTIASVKAKI 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p5ENP_727078.1 Ubl_ubiquitin 1..76 CDD:340501 18/74 (24%)
Ubl_ubiquitin 77..152 CDD:340501 13/74 (18%)
Ubl_ubiquitin 153..228 CDD:340501 19/30 (63%)
Ubl_ubiquitin 229..304 CDD:340501
Ubl_ubiquitin 305..380 CDD:340501
Ubl_ubiquitin 381..456 CDD:340501
Ubl_ubiquitin 457..532 CDD:340501
F52C6.4NP_001379809.1 Ubl1_cv_Nsp3_N-like 1..>31 CDD:475130 16/34 (47%)
Ubl1_cv_Nsp3_N-like 72..>100 CDD:475130 17/28 (61%)
Blue background indicates that the domain is not in the aligned region.

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