Protein Alignment Ubi-p5E and F52C6.3

DIOPT Version :10

• Sequence 1: NP_727078.1
• Gene: Ubi-p5E / 326237
• FlyBaseID: FBgn0086558
• Length: 534
• Species: Drosophila melanogaster
• Sequence 2: NP_494127.2
• Gene: F52C6.3 / 186085
• WormBaseID: WBGene00018660
• Length: 197
• Species: Caenorhabditis elegans
• Alignment Length: 257
• Identity: 75/257 - (29%)
• Similarity: 121/257 - (47%)
• Gaps: 72/257 - (28%)

  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            |.:.:||.|||.||:|...|     ||.:::||:|:       :|         |:| |:
 Worm     1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV-------VF---------TVS-YD----- 38

  Fly    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK------AKIQDKEGIPPDQQRLIFAGK 124
                    :|         ||..|   :|..||:::||      |.:::.|.:..|.       .
 Worm    39 --------KG---------TGNQI---IEMEDTVQDVKIQEAQQAPLRESEEVTEDP-------I 76

  Fly   125 QLEDGRTLSDYNIQKEST---LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 186
            .:|....:.:.|::...|   ||     ..|::|:|:. .|:|.||:...|||:.:|||||.:|.
 Worm    77 SVESSEVIGNLNVKVAETQQELH-----HEGIRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKL 135

  Fly   187 GIPPDQQRLIFAGKQLE---DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 245
            .|.|:.|:|:.....|:   |..||.|.:.:..|||.|.:.:...:.:||||.||||||:.:
 Worm   136 RILPNTQKLLLENWDLDLFSDHSTLFDNSFENGSTLRLEVSIEKEIDVFVKTYTGKTITISI 197

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ubi-p5E	NP_727078.1	Ubl_ubiquitin	1..76	CDD:340501	19/74 (26%)
		Ubl_ubiquitin	77..152	CDD:340501	16/83 (19%)
		Ubl_ubiquitin	153..228	CDD:340501	28/77 (36%)
		Ubl_ubiquitin	229..304	CDD:340501	10/17 (59%)
		Ubl_ubiquitin	305..380	CDD:340501
		Ubl_ubiquitin	381..456	CDD:340501
		Ubl_ubiquitin	457..532	CDD:340501
F52C6.3	NP_494127.2	Ubl1_cv_Nsp3_N-like	103..173	CDD:475130	27/70 (39%)