DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p5E and Nedd8

DIOPT Version :10

Sequence 1:NP_727078.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_032709.1 Gene:Nedd8 / 18002 MGIID:97301 Length:81 Species:Mus musculus


Alignment Length:76 Identity:44/76 - (57%)
Similarity:59/76 - (77%) Gaps:0/76 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            |.|.|||||||.|.:::||:|.:|.:|.::::||||||.|||||::|||:.|.:|.:||.|...|
Mouse     1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGS 65

  Fly    66 TLHLVLRLRGG 76
            .|||||.||||
Mouse    66 VLHLVLALRGG 76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p5ENP_727078.1 Ubl_ubiquitin 1..76 CDD:340501 42/74 (57%)
Ubl_ubiquitin 77..152 CDD:340501 44/76 (58%)
Ubl_ubiquitin 153..228 CDD:340501
Ubl_ubiquitin 229..304 CDD:340501
Ubl_ubiquitin 305..380 CDD:340501
Ubl_ubiquitin 381..456 CDD:340501
Ubl_ubiquitin 457..532 CDD:340501
Nedd8NP_032709.1 Ubl_NEDD8 3..76 CDD:340504 41/72 (57%)
Interaction with UBE1C. /evidence=ECO:0000250|UniProtKB:Q15843 70..72 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.

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