DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p5E and fau-1

DIOPT Version :10

Sequence 1:NP_727078.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_505007.1 Gene:fau-1 / 179154 WormBaseID:WBGene00004499 Length:130 Species:Caenorhabditis elegans


Alignment Length:78 Identity:26/78 - (33%)
Similarity:39/78 - (50%) Gaps:5/78 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 521
            ||||:..|...|.||:|:.|.|:..:|..|...|     :..:.:..|.|.:..||.:..|:..|
 Worm     1 MQIFLLGLDNTTHTLDVDASTTLSAIKGVIGAGE-----EFSISYGSKVLSEELTLGECQIESLS 60

  Fly   522 TLHLVLRLRGGAI 534
            ||.:..||.||.:
 Worm    61 TLSVNGRLLGGKV 73

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p5ENP_727078.1 Ubl_ubiquitin 1..76 CDD:340501
Ubl_ubiquitin 77..152 CDD:340501
Ubl_ubiquitin 153..228 CDD:340501
Ubl_ubiquitin 229..304 CDD:340501
Ubl_ubiquitin 305..380 CDD:340501
Ubl_ubiquitin 381..456 CDD:340501
Ubl_ubiquitin 457..532 CDD:340501 24/74 (32%)
fau-1NP_505007.1 Ubl1_cv_Nsp3_N-like 1..71 CDD:475130 24/74 (32%)
Ribosomal_S30 72..129 CDD:398432 0/2 (0%)
Blue background indicates that the domain is not in the aligned region.

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