DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubi-p5E and ubq-2

DIOPT Version :10

Sequence 1:NP_727078.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_499695.1 Gene:ubq-2 / 176718 WormBaseID:WBGene00006728 Length:128 Species:Caenorhabditis elegans


Alignment Length:78 Identity:76/78 - (97%)
Similarity:76/78 - (97%) Gaps:0/78 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 521
            ||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
 Worm     1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

  Fly   522 TLHLVLRLRGGAI 534
            |||||||||||.|
 Worm    66 TLHLVLRLRGGII 78

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p5ENP_727078.1 Ubl_ubiquitin 1..76 CDD:340501
Ubl_ubiquitin 77..152 CDD:340501
Ubl_ubiquitin 153..228 CDD:340501
Ubl_ubiquitin 229..304 CDD:340501
Ubl_ubiquitin 305..380 CDD:340501
Ubl_ubiquitin 381..456 CDD:340501
Ubl_ubiquitin 457..532 CDD:340501 73/74 (99%)
ubq-2NP_499695.1 Ubl_ubiquitin 1..76 CDD:340501 73/74 (99%)
Ribosomal_L40e 79..126 CDD:395807 76/78 (97%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.