DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubi-p5E and RpL40

DIOPT Version :10

Sequence 1:NP_727078.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster
Sequence 2:XP_317555.2 Gene:RpL40 / 1278028 VectorBaseID:AGAMI1_014091 Length:128 Species:Anopheles gambiae


Alignment Length:78 Identity:77/78 - (98%)
Similarity:77/78 - (98%) Gaps:0/78 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 521
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mosquito     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

  Fly   522 TLHLVLRLRGGAI 534
            |||||||||||.|
Mosquito    66 TLHLVLRLRGGII 78

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubi-p5ENP_727078.1 Ubl_ubiquitin 1..76 CDD:340501
Ubl_ubiquitin 77..152 CDD:340501
Ubl_ubiquitin 153..228 CDD:340501
Ubl_ubiquitin 229..304 CDD:340501
Ubl_ubiquitin 305..380 CDD:340501
Ubl_ubiquitin 381..456 CDD:340501
Ubl_ubiquitin 457..532 CDD:340501 74/74 (100%)
RpL40XP_317555.2 Ubl_ubiquitin 1..76 CDD:340501 74/74 (100%)
Ribosomal_L40e 79..126 CDD:395807 77/78 (99%)
Blue background indicates that the domain is not in the aligned region.

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