DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sk2 and cerkl

DIOPT Version :10

Sequence 1:NP_647762.3 Gene:Sk2 / 326219 FlyBaseID:FBgn0052484 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_001082943.1 Gene:cerkl / 100037318 ZFINID:ZDB-GENE-070410-38 Length:577 Species:Danio rerio


Alignment Length:622 Identity:123/622 - (19%)
Similarity:206/622 - (33%) Gaps:238/622 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 QRKKGSHVFRVRLDATGFT---LQRESPGGS---IVKEQHVRISDIVGARCMRPKKSRRLAMSGA 98
            |.:|.||  .|.|..|..|   :|.|:|...   ..:|::|.:.|:...:.    |.||      
Zfish    85 QIEKKSH--DVVLTTTRVTWTPIQPETPTADRDLKKQEEYVDLKDVFAVKV----KRRR------ 137

  Fly    99 CACSSGNPNSPAISASGDHHRPATTPSKCSTNSRDNIPSDGGDVSAFLYVFAYVLKKRSLRSELH 163
               |:|.                               ..||   ..|.:..:..||:.|:.:.|
Zfish   138 ---SAGQ-------------------------------QSGG---TLLGITLFQCKKKGLKLKDH 165

  Fly   164 RERTVLTLRFRSFDTFEDNMREADRWYRSLRWQLHRTLEEIFVAPTVDERRRRVLVLLNPKSGSG 228
                .:.|...|.|       ..:.|:::|:..|:          ....|.:.:.|.:||.|...
Zfish   166 ----AIHLNNLSVD-------HCEIWFKTLKELLN----------GFKNRPKSLKVFVNPISHKK 209

  Fly   229 DAREVFNMHVTPVLNEAEVPYDLYVTKHSNFAIEFLSTRCLDAWCCVVAVGGDGLFHEIVNGLLQ 293
            :|.:::...|.|:...|::..|:.:|:....|:..|....|:.:..||.|||||...|:.:|||.
Zfish   210 EAYQIYLDEVAPLFKLADIQVDVTITERKGHALSILKDCSLEDYDGVVCVGGDGSVSEVAHGLLL 274

  Fly   294 RQD----------WAHVLPHLALGIIPCGSGNGLARSIAHCYNEPYFSKPVLGAALTVISGRSSP 348
            |..          :..|...|.||:||.||.:.:|.|:       :..:....|||.:|.|...|
Zfish   275 RAQMDAGRDTDSIFTPVQAALPLGVIPAGSTDVVACSV-------HGIRRAATAALHIIMGHHQP 332

  Fly   349 MDVVRVQLQSRSLYSFLSIGWGLISDVDIESERIRMLGYQRFTVWTLYRLVNLRTYNGRISYLLT 413
            :||.          ||..:|              |:|   ||....::      .:.||...|..
Zfish   333 VDVC----------SFSCMG--------------RLL---RFGFSAMF------GFGGRTLALAE 364

  Fly   414 DHEVSSTHSATGYAAQRRMQSSRSCNTHIDMLNGPAPIYHSSAEYLPQEFADVISLETSINQSFR 478
            .|.                                                              
Zfish   365 RHR-------------------------------------------------------------- 367

  Fly   479 SRCDSWLSGGSRRSFYYSISESIYHSLADESEFAGLAAASLENRQQNYGPASELPDLNEPLSEDQ 543
                 |:....||.|  ::.:::.....::.|.:.|.|...|::::            ..|:.|.
Zfish   368 -----WMPPSQRREF--ALIKTLAKLKPEDCELSFLTAKGAEDQKK------------AELNGDG 413

  Fly   544 G------WLVEEGEFVMMHAVYQTHLGIDC-------HFAPKAQLNDGTIYLILIRAGISRPHLL 595
            |      |...:|.|:.:     :.:.|.|       ..||..:||:|::.||.: ...||...:
Zfish   414 GDICEGDWQSRKGLFLNI-----SIMAIPCLCSMAPRGLAPNTRLNNGSMALISV-GNTSRSEFI 472

  Fly   596 SFL--YNMSS---GTHLPESHDDHVKVLPVRAFRLEP 627
            ..|  ||.::   |....|:|.       |:|.||.|
Zfish   473 KHLKRYNSTNNQFGFSFIETHS-------VKAVRLRP 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sk2NP_647762.3 PLN02958 <213..639 CDD:215517 91/443 (21%)
cerklNP_001082943.1 DAGK_cat 92..565 CDD:445337 119/613 (19%)
CERK_C 349..577 CDD:466025 40/254 (16%)

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