DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32052 and smpd1

DIOPT Version :10

Sequence 1:NP_729555.4 Gene:CG32052 / 326184 FlyBaseID:FBgn0044328 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001313465.2 Gene:smpd1 / 556700 ZFINID:ZDB-GENE-110411-222 Length:591 Species:Danio rerio


Alignment Length:499 Identity:141/499 - (28%)
Similarity:213/499 - (42%) Gaps:111/499 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 PGA-QARIGYFWHISDLHLDTLYSTQGDIYRSCWELARSVSGSNANSAAS---EPPGPFGHYN-C 78
            ||: ::||.:   ::|:|.|..| |:|    |..|..:.:...|.:..||   ...|.:|.|: |
Zfish   161 PGSPRSRILF---LTDIHWDAEY-TEG----SLAECNKPLCCRNDSGRASWRHAGAGYWGTYSKC 217

  Fly    79 DSPWRLIESAVKTMKAKQGDNVEFVLWTGDALSHSAQPLSEQKQHEILRNITEL----LGRSFSS 139
            |.|.|.:|:.::.: ||.|. .::|.||||..:|:....:..:|...|..|:.|    |||:.: 
Zfish   218 DLPLRTVENLLENV-AKSGP-WDWVYWTGDIPAHNVWSQTRNQQLNELVTISRLIHKHLGRNVT- 279

  Fly   140 QFIFPVLG-HED------------GSGS----YRRLGELWRHWLPSEALVTFDQGGYYSIEQTKS 187
              ::|.:| ||.            |:.|    |..:.:.|..|||.|||.|..:||:||:| .:.
Zfish   280 --VYPAVGNHESTPVNSFPPPFVHGNHSSRWLYETMAKEWAPWLPEEALETIRRGGFYSVE-VEP 341

  Fly   188 RLRIVALNTNFMRLDPDPDPRASLSLRWPAEYFAEPKASVSSISAEDELLAEQQWLWLEEVLTKS 252
            .||:|:||.||          .|....|         ..|:|....|:|      .||.::|.:|
Zfish   342 GLRLVSLNMNF----------CSRENYW---------LMVNSTDPADQL------QWLIQILQES 381

  Fly   253 KEKQETVYIVGHMPPGVDERHLGTQHNQLTFTERN-NQRYLDMVRRFAPVIQGQFFGHLHSDTFR 316
            :.|.|.|:|:||:|||              |...: :..|..:|.|:...|.||||||.|:|.|:
Zfish   382 ENKGEKVHIIGHIPPG--------------FCLSSWSWNYYHIVNRYESTITGQFFGHTHTDEFQ 432

  Fly   317 LIYDAK--GNPISWLMIAPSIVPRKAGIGSSNNPALRLYKFD----TGSGQVLDYTQFWLDLPLA 375
            :.||.:  ..|:|...||||:.     ...:.||..|:|..|    ..|..|||:..|.|:|.||
Zfish   433 MFYDEETLTRPLSVAFIAPSVT-----TFVNLNPGYRVYYVDGNYPDSSRMVLDHETFILNLTLA 492

  Fly   376 NRA-----NEPTWQPEYNLTHYYALPEISAVALHNFAERFTGTD----LSWFTRYHRANAVRYHS 431
            |..     ..|:|...|..:..|.|..:....:....:.....|    ..|:. :|:.     |.
Zfish   493 NNRPLKPDPRPSWTLLYRASEAYGLSTLFPSDMEALIKHMVNDDRIFQQFWYL-FHKG-----HV 551

  Fly   432 GSACPGLCMLNHYCAITRLDYDEFRICLEKEQLALQGRAPAALM 475
            ...|...|..:..|.:....||....|     ..|.|..|...|
Zfish   552 SKPCTDTCKTSIICFLHSGRYDLLTQC-----SPLHGDTPKKSM 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32052NP_729555.4 MPP_ASMase 28..351 CDD:277321 105/350 (30%)
ASMase_C 324..462 CDD:466022 36/150 (24%)
smpd1NP_001313465.2 None

Return to query results.
Submit another query.