DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and WLIM1

DIOPT Version :10

Sequence 1:NP_610098.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_172491.1 Gene:WLIM1 / 837558 AraportID:AT1G10200 Length:190 Species:Arabidopsis thaliana


Alignment Length:160 Identity:35/160 - (21%)
Similarity:55/160 - (34%) Gaps:48/160 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IVCHKCQEAITKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYT---- 65
            :.|.|....:.|  :||..:.:|...|.||||...:..:.:|...|...|...|.:.:..|    
plant    11 MACDKTVYLVDK--LTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHFDQNFKRTGSLE 73

  Fly    66 ------------------------------------CAGCKKPI--LEKTICAMGESWHEDCF-C 91
                                                |.||.|.:  :|| :...|..:|:.|| |
plant    74 KSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPIEK-VSVNGTLYHKSCFKC 137

  Fly    92 CGGACKKPLANQTFYERDGKPYCKKDYEDL 121
            ..|.|  .::...:...:||.|||..:..|
plant   138 THGGC--TISPSNYIAHEGKLYCKHHHIQL 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_610098.1 LIM 126..176 CDD:259829
LIM 7..58 CDD:413332 14/50 (28%)
LIM 66..118 CDD:413332 18/54 (33%)
WLIM1NP_172491.1 LIM1_SF3 6..68 CDD:188824 15/58 (26%)
LIM2_SF3 110..170 CDD:188825 19/59 (32%)
Blue background indicates that the domain is not in the aligned region.

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