DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31988 and DAR6

DIOPT Version :10

Sequence 1:NP_610098.1 Gene:CG31988 / 326182 FlyBaseID:FBgn0051988 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_201463.1 Gene:DAR6 / 836794 AraportID:AT5G66620 Length:644 Species:Arabidopsis thaliana


Alignment Length:176 Identity:39/176 - (22%)
Similarity:59/176 - (33%) Gaps:57/176 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VCHKCQEAITK-RMITALGKTWHPEHFLCHHCDEQIL--DATFNVQSGEPVCNKCFVERYTYTCA 67
            :|..|..|:.. ..:..||..|||..|.|..|.:.|.  |...:|.:.....:|...|||.|.|.
plant   285 LCGGCNFAVEHGGSVNILGVLWHPGCFCCRACHKPIAIHDIENHVSNSRGKFHKSCYERYCYVCK 349

  Fly    68 GCK------KPILEKTICAMGESWHEDCFCCGGACKKPLANQTFYERDGKPYCKKDYEDLFAARC 126
            ..|      .|..|:..|.:                        :|.||.|            :|
plant   350 EKKMKTYNNHPFWEERYCPV------------------------HEADGTP------------KC 378

  Fly   127 AKCEK--PITDSAVLAMNVKWHRDCFRCNKCENPITSQTFTIDGDK 170
            ..||:  |...:.|:..:.:|     .|.:|.|     :..:|.|:
plant   379 CSCERLEPRESNYVMLADGRW-----LCLECMN-----SAVMDSDE 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31988NP_610098.1 LIM 126..176 CDD:259829 11/47 (23%)
LIM 7..58 CDD:413332 15/53 (28%)
LIM 66..118 CDD:413332 9/57 (16%)
DAR6NP_201463.1 Smc <27..>220 CDD:440809
LIM_DA1 286..341 CDD:188782 15/54 (28%)
DA1-like 428..642 CDD:463530
Blue background indicates that the domain is not in the aligned region.

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